Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01752 ATGGCGTCTATTCGAAGAACTTTGTCCCCAGTTGCTAGAGCTGGAACTGCAACAAATGTTGAAGTCTGTTCAGTAGCTTCTCCGTTGTCTAAGTCGTCATCAAGTCCTCAGAATTGGTCTCCTTCAGTTGGATTGGACTACCGTGCTTTTGTTTTTGGTGCTTTCTCCCCAAGGTCTTTCAGGGGGTTTGAGAGATCAAAGCCCAGGGGCCAGCTTTGGAGGAAGGTGCTTTTCCATTTCTTCATTTGTTTCATTGTTGGTGTTTCTATTGGACTCATTCCACTTGCATCAACACACATGTCAATGAATCTCATGCCAAAACATCGAGCCTTCTCATTTGAGGTGATATCTGCAATGGGAAATTTCCAGCAGCTTGAAAACATAGCGATAAATGTGACACCACCAATCAATGAGCCTGTGAATTTTAATGCTTCTTTGTATGCAGCCGTAAAAGAACCAGAACTAGTAGATGGAGTTGCACATAATATATCGAATAGCCAAATCAGTGAACATTCACATGTGGAGTCTCAGAAGCTTCTCATCATTGTGACTCCAACATACAATCATCTATTTCAAGCATATTACTTGCATCGGTTGTCACAAACATTAAAACTGGTCTCACCTCCCTTGTTGTGGATTGTTGTTGAGGTGACTTCCCAATCTGAAGAAACTGCTGACATCTTAAGGAGTAGTGGGATTATGTACAGGCATCTCATTTGTAAAACGAATATAACCAGCCCAAGGCATAGGAGCATTCTTCAAAGAAATATTGCAATGGCTCATATTGAAACTCATCGTCTTGATGGAATTATTTACTTTGCTGATGATGATAACATCTACTCAGTAGAGCTCTTTCAGCAAATGAGAGAAATAAGGCGATTTGGAACATGGACTGTAGCAAGATTATCAGGGGATAAAAGTAGAATTGTCTTGCAAGGACCCATTTGTAATGGAAGTCAAGTAATTGGATGGCATACATATGAATCAAATCGGAAATCAAAAAGATTTCATGCTGAAATGTCAGGTTTTGCCTTCAATAGTACAATACTGTGGAACCCAAAGAAGTGGCATCGCCCCACTTTGGAACCTATTAGGCAACTTGACTCGGTCAAGGAAAGTTTATGGGTCAGCACATTGATTGAGCAGGTGATTGAAGATGAAAGTCAAATGGAGGGCTTAAAGGATGATTGCTCGAGAGTTATGGTCTGGCATATTGATCTTGAATCATCTCATTCATCATATCCTCAGAAATGGATTGTAAAGAAGAACCTAGATGCCATTTTTCAGCTTCCACTTGTGTGA 1302 0.4048 MASIRRTLSPVARAGTATNVEVCSVASPLSKSSSSPQNWSPSVGLDYRAFVFGAFSPRSFRGFERSKPRGQLWRKVLFHFFICFIVGVSIGLIPLASTHMSMNLMPKHRAFSFEVISAMGNFQQLENIAINVTPPINEPVNFNASLYAAVKEPELVDGVAHNISNSQISEHSHVESQKLLIIVTPTYNHLFQAYYLHRLSQTLKLVSPPLLWIVVEVTSQSEETADILRSSGIMYRHLICKTNITSPRHRSILQRNIAMAHIETHRLDGIIYFADDDNIYSVELFQQMREIRRFGTWTVARLSGDKSRIVLQGPICNGSQVIGWHTYESNRKSKRFHAEMSGFAFNSTILWNPKKWHRPTLEPIRQLDSVKESLWVSTLIEQVIEDESQMEGLKDDCSRVMVWHIDLESSHSSYPQKWIVKKNLDAIFQLPLV* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01752 433 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 179 426 IPR029044 -
Lapu9g01752 433 Pfam Glycosyltransferase family 43 199 408 IPR005027 GO:0015018|GO:0016020
Lapu9g01752 433 FunFam Glycosyltransferases 179 421 - -
Lapu9g01752 433 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 71 425 IPR005027 GO:0015018|GO:0016020
Lapu9g01752 433 SUPERFAMILY Nucleotide-diphospho-sugar transferases 179 424 IPR029044 -
Lapu9g01752 433 CDD GlcAT-I 178 408 IPR005027 GO:0015018|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01752 Lapu-Chr9 32360491 32368850 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01752 1 430 Glycosyltransferase AT1G27600 45.244 4.60e-123 361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01752 K20869 - gmx:100808765 741.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01752 9 32360491 32368850 Lapu9g01752 9 32360491 32368850 ECH