Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01741 ATGGAAACGCATATGGCAACTTCATTCACCACTCTCCCACCTAATTGCTCCATTCAGAAGAGACCCATTATCTTCCCACACCATCCCATTACTTTGGGACTTTCCACAAACTTTAAGCAGATCTTAAGAGCCATGCCGCAAATTCCGCTGCAAATCCATGCTTCCAAAGCCATCATCACACACATTAAAACCAAATTTCTTAACGCTATTGTGGATTCAGCCTTTGAGTTTGTCGACCAGCTAGTGCTTCCATCTCAGAGTAACTTTGCTCCAGTGGAAGAATTAGGGGAAGCCATGGCTATCACCAACATTGAAGGCCGCATACCAGATCATTTTCCAGAAGGTGTCTACGTCCGAAATGGACCAAACCCACTCTTCGGAGGATTGAAATCAGCCAAGTCTATGTTGGGGAGGACAAAGAGTGTTTGGGTGGAAGGAGAAGGAATGCTTCATGCTTTGTACTTCAAAAGGAAAAATGGCGGCTCCTACACCATCCTCTACAACAACAGATACGTTCAAACTGTAACATACAACCTTGAGAAACAAAGTAACAACCCTTTGTTTCTCCCTGCCGTAAAAGGAGATTCATTGGCCGTATTGTGTTCTATGTTTCTAAACTGGCTGAGATTTGGAAAACTAAATAAAGATTATAGCAACACCAATGTTTTTGAGCATTCAGGCAAGTTGTACTCGGTTTCGGAGAATCACATCCCACAAGAGATTGACATCTTCACACTAAATACTTTGAAATACTGGGATGTCAATGGCGCATGGAATCGTCCTTTTGCAAGTCACCCCAAGAAAGTTCTCGGTACAGGAGAACTTATTATTTTTGGAGTAGATGCAACTAAACCTTATCTTGAAATTGGAATAGTTTCAGCTGATGGAAAGGAATTGGTTCATAAAGCAGACGTAGAACTAGACAGATGCAGTTTATGCCATGAAATAGGCATCACAAGCAGGTATATAGTGATATTCGATTTCCCACTGATTGTAGATTCAAACAGACTATTCAGAAGAGGCCCATTAATCAAATTCGACAAGGAGAAATACGCCAGGATTGGGATAATGCCGCTCTATGGCGATGCTAACTCAATCCAGTGGTTTGAGGTGGAACCAAATAGCACATTTCATGTCATCAATTCCTTCGAAGATGGTCATGAGGTTGTGTTGTGGGGTTGTAGAGCACTAGATTCAATAATTCCAGGACCTGAAGATGGTCTAAAGGAATCTAAGTTATTCTCTCGGTGTTATGAATGGAGATTAAACATGAAAAGTGGGGAGGTTAAGGAGAAATATCTCACTGGACCAGAACAGTTCATGGATTTTCCAGTAATTAATGCAAGTTTTACAGGAATTAAGAATAGATACGGATACACCCAAGTGGTTGATCCCACTGCAAGTTTTGCTGCAGATATTCCTAAATACGGAGCTTTAGCAAAGTTATACTTTGGTGAACCATGTTCAGAATTCCATATGGGAGAGAGACAAGAAGAAGAGCTTATAAGGGTGGACTATCACAGGTTTGAAAAAAATGAATTTTGCACTGGATCTGCTTTTGTCCCTAAGGAAGGTGGCCTTGAAGAAGATGATGGTTGGATAATCACTTTTGTTCACAATGAAGATAATGGAATATCTCAAGTTCATATAATTGACACAAAGAAGTTTTCAGAAGAGGCTGCTGCCAAAATAACAATACCTTACAGAGTTCCGTATGGATTTCACGGAGCTTTCGTGTCAATCCCATTTTAG 1752 0.4075 METHMATSFTTLPPNCSIQKRPIIFPHHPITLGLSTNFKQILRAMPQIPLQIHASKAIITHIKTKFLNAIVDSAFEFVDQLVLPSQSNFAPVEELGEAMAITNIEGRIPDHFPEGVYVRNGPNPLFGGLKSAKSMLGRTKSVWVEGEGMLHALYFKRKNGGSYTILYNNRYVQTVTYNLEKQSNNPLFLPAVKGDSLAVLCSMFLNWLRFGKLNKDYSNTNVFEHSGKLYSVSENHIPQEIDIFTLNTLKYWDVNGAWNRPFASHPKKVLGTGELIIFGVDATKPYLEIGIVSADGKELVHKADVELDRCSLCHEIGITSRYIVIFDFPLIVDSNRLFRRGPLIKFDKEKYARIGIMPLYGDANSIQWFEVEPNSTFHVINSFEDGHEVVLWGCRALDSIIPGPEDGLKESKLFSRCYEWRLNMKSGEVKEKYLTGPEQFMDFPVINASFTGIKNRYGYTQVVDPTASFAADIPKYGALAKLYFGEPCSEFHMGERQEEELIRVDYHRFEKNEFCTGSAFVPKEGGLEEDDGWIITFVHNEDNGISQVHIIDTKKFSEEAAAKITIPYRVPYGFHGAFVSIPF* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01741 583 PANTHER BETA-CAROTENE DIOXYGENASE 96 579 IPR004294 GO:0016702
Lapu9g01741 583 Pfam Retinal pigment epithelial membrane protein 91 580 IPR004294 GO:0016702
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01741 Lapu-Chr9 32262206 32278952 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01741 - - gmx:100817207 998.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01741 9 32262206 32278952 Lapu9g01741 9 32262206 32278952 ECH