Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01732 ATGGAAGACGCCGGGAAACCTATGAAGTCCGGCAACCTATCGCGTAAGGTGGTTGAGTTGGCTGTCGGAGAAGCACACAATCTCATTCTTACCGGGGATGGCAGTGTGTACAGTTGGGGTAGGGGAATGTTTGGACGGATTGGGAGTGGCTCAGAAAAAGACGAGCTTTTTCCAGTTCAACTTAACTTTGGAAACCCAAATCCAAATGGAACACAAGACACTGTCAAGATAGTGGGAATTGCTGCCGGTGCTTATCATAGTCTTGCTCTTGCAGCATTGACAGACATCTGCTATTTTATTGACTGCATTTTTAAAACTAACCTGACATGCATGAAAGCTACTGTTGCACCGAAGTTTGTTGAATTTGTGTTATGTACTAGCATCTACACCCTTGACTACTCTATAGATGGTCAACTTGGTACAAATGGAGAGGAATCACATGACAATGAATATGCTGTTGGAGACACTTCTTTAGTGCCCCGCTTACTGAACAGGTTTGTTGAATTGCACCGTGCTGATTCTTCATCGGGTGTGTCTGAAGCAGAAGGCAAAACATCACTTAAGATATGTGCTGTGAATGCTGGAGGAATGATGTCTCTGGCTATTGATAACCGTGGGACCCTGTGGATGTGGGGAAACTGCCCACAACAAAGCAGAGAAGGTGAGTTAGCACTTGTAAGCAGTTTCACTCCAACTCCAGTTTGGGATTTTCAGGGTCGATCTGTTGTCAAAGTTGCATGTGGAAATGAGCACGTCGTAGCGCTGGTTACTGCTGGCGAATCATACAATGGTGAAGATCTAGTATGCTACTCTTGGGGTTATAACACCCGTGGCCAATTAGGCTTGGGGGATAGAGAGAGCAGGCTGCATCCGGAAGTTGTTAAAACATTTGATGAGGAATCACCCTATGAGGTGGCATGTGGTGCTTATCACACTGCTTTGCTCACTCGTATAAAGAAAACTAGTGACACATTAGACAGCATATGCTGGACCTTTGGCCTTGGAGATAATGGCCAGCTTGGGCATGGAACAACACAGAGCACATTATTTCCTACGCCTGTTAAAGAATTGCCACAAAATGTATCTCTTATTTCTGTTGACTGTGGTTTGTTTCATACAAGTGTAGTTTCCGCAGGTGGGGATGTGTGGTCATGGGGAATGGAGAAGGGCCTTGGCTTATGCCCTGATGCTAGTCGAGCTGCAACAGATTCCGGTGATGCACTCTCTCCCCGTCTTATGTCATGGAAGCCAAATCAACCTAAATTTCCAGATCCAGTTAAACTTGCATGTGGGGCCGCACATACTGTAATAATTGCGCAGGGGGGATATAGAATGTGGTCTTGGGGTAGGGGAAGAAGTGGAGTTCTTGGAGATGGTAAAGGAGTAGATTGTTACACTCCCACGCTCGTAATGTGGCCTCAAACGATGGAGGATTCTGAGGAAGAGAAAGTAAAAAGCAATGGTGAACAAGATAATGCTAGAGAAAAGGAGACTGAAGCAACCACAGAAGTAGAAGAGAAACTATCCACAGCATTGAATGAGCTGAAGCTGCTTCGAACAAAGCTATCTGTGATGGAAAAATATGCCAGTATTCTTCATGGTTCTGTTTTTGGAAAGCCTTTTGATGAGCAAGATATCCCTGACTCCTTGAAGAATTCAAGTTCATTTGACATTGGAAAAGAATGGGAGAAGATGTTAGGGACAGCAGATCATAGGAAGCTAATTAGGTTGGAAATGTTTTACCAAGACATGCTTGCTGGAGTAAAAGATGAACTAATGAAGAGGAGGATCAAGGAAATTGTAAAGGAGTGTCTCCAATCTTCGGAGGTGTAA 1833 0.4446 MEDAGKPMKSGNLSRKVVELAVGEAHNLILTGDGSVYSWGRGMFGRIGSGSEKDELFPVQLNFGNPNPNGTQDTVKIVGIAAGAYHSLALAALTDICYFIDCIFKTNLTCMKATVAPKFVEFVLCTSIYTLDYSIDGQLGTNGEESHDNEYAVGDTSLVPRLLNRFVELHRADSSSGVSEAEGKTSLKICAVNAGGMMSLAIDNRGTLWMWGNCPQQSREGELALVSSFTPTPVWDFQGRSVVKVACGNEHVVALVTAGESYNGEDLVCYSWGYNTRGQLGLGDRESRLHPEVVKTFDEESPYEVACGAYHTALLTRIKKTSDTLDSICWTFGLGDNGQLGHGTTQSTLFPTPVKELPQNVSLISVDCGLFHTSVVSAGGDVWSWGMEKGLGLCPDASRAATDSGDALSPRLMSWKPNQPKFPDPVKLACGAAHTVIIAQGGYRMWSWGRGRSGVLGDGKGVDCYTPTLVMWPQTMEDSEEEKVKSNGEQDNAREKETEATTEVEEKLSTALNELKLLRTKLSVMEKYASILHGSVFGKPFDEQDIPDSLKNSSSFDIGKEWEKMLGTADHRKLIRLEMFYQDMLAGVKDELMKRRIKEIVKECLQSSEV* 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01732 610 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 267 318 IPR000408 -
Lapu9g01732 610 MobiDBLite consensus disorder prediction 476 505 - -
Lapu9g01732 610 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 34 93 IPR000408 -
Lapu9g01732 610 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 327 379 IPR000408 -
Lapu9g01732 610 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 305 315 IPR000408 -
Lapu9g01732 610 Gene3D - 2 266 IPR009091 -
Lapu9g01732 610 Gene3D - 267 516 IPR009091 -
Lapu9g01732 610 SUPERFAMILY RCC1/BLIP-II 128 473 IPR009091 -
Lapu9g01732 610 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 380 441 IPR000408 -
Lapu9g01732 610 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 206 258 IPR000408 -
Lapu9g01732 610 Pfam Regulator of chromosome condensation (RCC1) repeat 380 438 IPR000408 -
Lapu9g01732 610 Pfam Regulator of chromosome condensation (RCC1) repeat 270 315 IPR000408 -
Lapu9g01732 610 Pfam Regulator of chromosome condensation (RCC1) repeat 33 90 IPR000408 -
Lapu9g01732 610 Pfam Regulator of chromosome condensation (RCC1) repeat 330 375 IPR000408 -
Lapu9g01732 610 PANTHER REGULATOR OF CHROMOSOME CONDENSATION 14 212 - -
Lapu9g01732 610 MobiDBLite consensus disorder prediction 475 505 - -
Lapu9g01732 610 SUPERFAMILY RCC1/BLIP-II 11 143 IPR009091 -
Lapu9g01732 610 PRINTS Chromosome condensation regulator RCC1 signature 36 52 IPR000408 -
Lapu9g01732 610 PRINTS Chromosome condensation regulator RCC1 signature 248 266 IPR000408 -
Lapu9g01732 610 PRINTS Chromosome condensation regulator RCC1 signature 17 30 IPR000408 -
Lapu9g01732 610 PRINTS Chromosome condensation regulator RCC1 signature 322 343 IPR000408 -
Lapu9g01732 610 Coils Coil 476 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01732 Lapu-Chr9 32160720 32164779 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01732 - - gmx:100815199 969.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01732 9 32160720 32164779 Lapu9g01732 9 32160720 32164779 ECH