Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01731 ATGGAATCCCATGCCTCCAATTCCAACTCTCATTCTAACCATAATAACAACAACGACCATCACCATCACCACCACCACCCTAGGTTCAAACCTAGCCAGCCCATCTCAGATCGAATAGTCCGTGCCCTCCGCCACCGTCTCCGCCTCCTCCACCGTGCCGGCTCCACCTTCTTCATCTTCGGCGCCACCGGTAACGTGTACACAGTCACCCTCTCCTCCATTCCCTCGTGCACCTGCCCTGACCGTACAACCCCATGCAAGCACATCCTCTTTGTTTTCATTCGAGTTTTGGGAGTGTCCCTTGATGACGTGTGTCTAAGGAGGAGGACCCTTCGTCCCTGCCAGCTACAACGCCTCCTCAGCACGCCGACGTTGCCGGAGGCAGTGGCAGGGGGCACCCTCCGGCAGAGGTTCCACCAACTCTTCTTTGGTGGAGGGTCAACGAGGCCAAAGATAGAGACGGAGGAGGGTGCCACGTGCCCGGTTTGCCTTGAGGAAATGGAGAAGGAGCAAAACCTGGTTGCATGTGGGACATGCCGTAACCCTATTCATGAAGAGTGCTTGATGAGGTGGAAGAGAACAAGGGGAAGAAGAACGGCTAGTTGTGTGATTTGTAGAGCGAGGTGGAGGGATAGGGTGGAGCAGGATAAGTATCTGAACCTGTCTGCGTATGTTAGTGAAGATGACATGGGAGAACCTGCTGGGGGACTCTGCACTGGCTGA 723 0.5519 MESHASNSNSHSNHNNNNDHHHHHHHPRFKPSQPISDRIVRALRHRLRLLHRAGSTFFIFGATGNVYTVTLSSIPSCTCPDRTTPCKHILFVFIRVLGVSLDDVCLRRRTLRPCQLQRLLSTPTLPEAVAGGTLRQRFHQLFFGGGSTRPKIETEEGATCPVCLEEMEKEQNLVACGTCRNPIHEECLMRWKRTRGRRTASCVICRARWRDRVEQDKYLNLSAYVSEDDMGEPAGGLCTG* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01731 240 ProSiteProfiles Zinc finger RING-CH-type profile. 152 212 IPR011016 GO:0008270
Lapu9g01731 240 PANTHER RING FINGER AND SWIM DOMAIN-CONTAINING PROTEIN 2 14 215 IPR039903 GO:0061630
Lapu9g01731 240 SUPERFAMILY RING/U-box 151 213 - -
Lapu9g01731 240 Pfam SWIM zinc finger 67 95 IPR007527 GO:0008270
Lapu9g01731 240 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 145 223 IPR013083 -
Lapu9g01731 240 ProSiteProfiles Zinc finger RING-type profile. 160 206 IPR001841 -
Lapu9g01731 240 ProSiteProfiles Zinc finger SWIM-type profile. 67 97 IPR007527 GO:0008270
Lapu9g01731 240 MobiDBLite consensus disorder prediction 1 34 - -
Lapu9g01731 240 Pfam Ring finger domain 159 206 IPR001841 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01731 - - var:108321788 422.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01731 9 32157633 32158355 Lapu9g01731 9 32157633 32158355 ECH