Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01717 ATGGATGACGAGGAGAGAGAGAGGCTTCTGGAAAGGGAGAGAATGCAAATCCAGATGATTCGCCAGCTCGATCTCGAGCACCTTGAAGTCGAAGAAGTCGATTACTCCGACGAAGACGACGACACCGAGGTCGATGAGGAATATGCGATTTTACTTTCACAATTAAATTCGTCTAGTCCTCCTCACTCTTCCGCCGAATTCACTTTTGACACATATATCACGCCGTTGCATACGTATCTCGGTGATGTCGAAGACACGCGCCACAGGACTGCGTTCTTGGACGGTGGAGCTGTATTGAACATTCCGCTTTTTTGTCTACGAGGAGTTGTACTCTTTCCCGGGGCTACACTTCCCCTTAGAGTTATCGAACCTCGTTTGGTGGCTGCTGTGGAGAGAGCTTTAACTCAAAATGATATTCCTCATACAATTGGTGTGATTCGAATCCACAGGGATACTGCAACACGTAGGACAAAATCAGCAAGCGTTGGGACAACTGCAGAGATTCGACAAGTTGGGCGTCTGGGGGATGGTTCACTGAATGTAGTTACCCGTGGACAACAACGGTTTCGCCTAAGACGGTCCTGGAATGACGTGGAAGGAGTGCCTTATGGAGAGATCCAAATTATCAAGGAAGATCTGCCAGTGAGAACTCCAAGGGATGCTTTTGGCAAATTAGCACCATTGAGTAACATGCCCTGTAGCCAAGCTGTCTCACATGCTGTGTCTTCACCATATTCTCATGGTAAAATGCAAAGGTCAAAAAATGAGAAAAGTGATTCAGAATCAAATTCAGAAGGAAGTTTTGAGAGTGAGCTCTCATTGGTGGAAAGGAAAATCCATCTATCAGTTGTTGGCTCCAGTTATGTGCATGATACAATGGATGAATCACCAAACAGCAGCGACACTAAATTCATGTGTAAGTCAGATCAGGAAATTAGATCCAATCTGGATTCAAGGACTGGAAACTGTTCCACTTCTGGAAAGCAGTCATGGAAAGAAGAGCTTAATAGACGTAAAAATATACGTGCCTTCACATCTCATAAAATTTCGAAAGCATTTTGGCCCCACTGGGCATATAGGATGTTTGACTCTTATTTGCTGGCGCAAAGGGTTGCAGATATGTGGAAGCGAATAGTGGGGGTGCCTAACATGGAAAGTCTTGTTAAGAAGCCTGATGTTTTATCATTTCACATAGCTAGTAAAATACCTGTGTCTGAGTCCACAAGGCAGGATCTTTTGGATATTGATGGCATTGCATACAGACTTCGTAGGGAAATTGAATTACTGGAGAGCATTGACCTTATCCGGTGTAAAAGCTGTGAGACTACAATTGCAAAACGAAGTGATATGTTGGTGATGTCAAGTGAGGGTCCTCTAAGTGCATACGTGAATCCAGGTGGTTATGTGCATGAGATAATGACTCTTTACAAGGCAAATGGTTTATCTCTCATTGGACCAGCAGTAGCTGAATACAGTTGGTTTCCTGGGTATGCCTGGACAGTTGCTACTTGTGCAACATGTAAAACCCAAATGGGGTGGCTTTTTACGGCCAGAAGCAAAAAACTGAAACCCAGCACTTTCTGGGGGATTCGGAGCTGTCAACTTGCCGAAGAAAAACGCGAAAACCTTTAG 1632 0.4449 MDDEERERLLERERMQIQMIRQLDLEHLEVEEVDYSDEDDDTEVDEEYAILLSQLNSSSPPHSSAEFTFDTYITPLHTYLGDVEDTRHRTAFLDGGAVLNIPLFCLRGVVLFPGATLPLRVIEPRLVAAVERALTQNDIPHTIGVIRIHRDTATRRTKSASVGTTAEIRQVGRLGDGSLNVVTRGQQRFRLRRSWNDVEGVPYGEIQIIKEDLPVRTPRDAFGKLAPLSNMPCSQAVSHAVSSPYSHGKMQRSKNEKSDSESNSEGSFESELSLVERKIHLSVVGSSYVHDTMDESPNSSDTKFMCKSDQEIRSNLDSRTGNCSTSGKQSWKEELNRRKNIRAFTSHKISKAFWPHWAYRMFDSYLLAQRVADMWKRIVGVPNMESLVKKPDVLSFHIASKIPVSESTRQDLLDIDGIAYRLRREIELLESIDLIRCKSCETTIAKRSDMLVMSSEGPLSAYVNPGGYVHEIMTLYKANGLSLIGPAVAEYSWFPGYAWTVATCATCKTQMGWLFTARSKKLKPSTFWGIRSCQLAEEKRENL* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01717 543 CDD CRBN_C_like 435 531 IPR034750 -
Lapu9g01717 543 MobiDBLite consensus disorder prediction 250 264 - -
Lapu9g01717 543 FunFam Lon protease homolog 363 427 - -
Lapu9g01717 543 Gene3D - 81 209 IPR046336 -
Lapu9g01717 543 ProSiteProfiles CULT domain profile. 432 539 IPR034750 -
Lapu9g01717 543 FunFam ATP-dependent protease La domain-containing protein 81 209 - -
Lapu9g01717 543 PANTHER CEREBLON 43 533 - -
Lapu9g01717 543 SUPERFAMILY PUA domain-like 100 430 IPR015947 -
Lapu9g01717 543 Gene3D - 363 427 - -
Lapu9g01717 543 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 435 525 IPR004910 -
Lapu9g01717 543 Gene3D Peptide methionine sulfoxide reductase. 428 543 - -
Lapu9g01717 543 SMART lon_5 100 431 IPR003111 -
Lapu9g01717 543 Pfam ATP-dependent protease La (LON) substrate-binding domain 100 430 IPR003111 -
Lapu9g01717 543 MobiDBLite consensus disorder prediction 239 267 - -
Lapu9g01717 543 FunFam Blast:Protein cereblon homolog 428 543 - -
Lapu9g01717 543 ProSiteProfiles Lon N-terminal domain profile. 101 431 IPR003111 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01717 K11793 - gmx:100779918 765.763
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01717 9 32007990 32013513 Lapu9g01717 9 32007990 32013513 ECH