Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01711 ATGGCGTCCAGAGATTCTGATTCGCAGTTGAAGATCGTCCATGGCGAAGCTGGTTACATACTCGAAGACGTTCCTCATTTCACCGACTACATTCTAAATCTTCCTACGTATCCGAATCCGCTTCGGTCCAATCCTGCTTACTCGGTTGTCAAGCAGTATTTTGTGCATATGGACGACACTGTGCCACAGAAGGTTCTATCTGTTTTTATTTACGATGGCGACCTGTTTGTGCATTTATTTCTCCGTTTCGTCAATCTTAAACACTTCTGCTATGTTGTTGTTCACAAGGATAGTCCAAGAGGTGTACATTTTAGACGTGCAGGCCCTCGACAAAAGGTTTACTTTAGATCGGATGATGTCCACGCATGCATTGTCACGTGCGGTGGACTCTGCCCTGGCCTCAACACTGTCATAAGGGAAATTGTCTGTGGTCTTTCTTACATGTATGGTGTTAATAAAGTCCTTGGCATTGATGGAGGTTATAGAGGTTTTTATTCCAAGAACACCATTACTTTAACACCTAAGGTGGTCAATGACATCCATAAGCGTGGGGGTACAATTCTTGGGACGTCACGAGGGGGACATGATACTGGCAAGATAGTTGACAGCATCCAGGATCGAGGAATTAATCAGGTTTACCATGTGACCACTGTTTATATTATTGGAGGAGATGGTACACAAAGAGGAGCAACTGTGATTTATGAGGAAATTAGACGTCGGGGTCTGAAAGTAGCAATTGCTGGAATTCCCAAAACCATAGATAATGACATCCCGGTTATTGACAAATCCTTTGGTTTTGATACTGCGGTTGAGGAGGCTCAACGTGCCATTAATGCTGCACATGTTGAAGCTGAAAGTATTGAGAATGGCATTGGTGTTGTAAAGCTAATGGGACGTTATAGCGGTTTTATTGCTATGTACGCTACTCTTGCTAGCAGAGATGTGGACTGTTGTTTGATTCCAGAGTCACCCTTCTACCTTGAAGGCAAGGGTGGACTTTTTGAATTTATTGACAAAAGGCTAAAAGAAAATGGACATATGGTAATAGTCATAGCTGAGGGAGCAGGACAAGATCTTCTTACTGAAAGCATGCAAGCCATGGACCAGAAAGATGCTTCTGGAAACAAACTACTTCAAGATGTTGGTTTGTGGATATCTCATAAGATCAAGGATCACTTTGCAAAGAAGGATAAGATCGCCATCAATCTTAAATATATAGATCCAACCTACATGATACGTGCAATTCCAAGCAATGCATCAGATAACGTCTACTGTACACTTCTTGCTCAGAGTGCAGTCCATGGTGCAATGGCAGGGTATACTGGATTTACAGTTGGACTGGTCAATGGTAGACATACTTATATTCCATTCAATAGAATCATTGAGAGGCAGAACAAGGTTGTTATTACTGACAGAATGTGGGCAAGACTCCTTTCTTCCACCAACCAGCCAAGCTTTTTGAGCTCGAAAGATTTAGATGAAGCCAAGAAAGCAGAACAACCTCCGAGTCAATTGTTAGAAGGGAGCAATTGCACTGATACTGGTGAAGCCGAGAAAAAGGAAAACACTCTCACTCGATTGTTAGAAGGGGACAATTTCAAAGATGAACCACAATCAGAAAACCATGCAGACAATGATATCGAGACAATAAATTAG 1656 0.4221 MASRDSDSQLKIVHGEAGYILEDVPHFTDYILNLPTYPNPLRSNPAYSVVKQYFVHMDDTVPQKVLSVFIYDGDLFVHLFLRFVNLKHFCYVVVHKDSPRGVHFRRAGPRQKVYFRSDDVHACIVTCGGLCPGLNTVIREIVCGLSYMYGVNKVLGIDGGYRGFYSKNTITLTPKVVNDIHKRGGTILGTSRGGHDTGKIVDSIQDRGINQVYHVTTVYIIGGDGTQRGATVIYEEIRRRGLKVAIAGIPKTIDNDIPVIDKSFGFDTAVEEAQRAINAAHVEAESIENGIGVVKLMGRYSGFIAMYATLASRDVDCCLIPESPFYLEGKGGLFEFIDKRLKENGHMVIVIAEGAGQDLLTESMQAMDQKDASGNKLLQDVGLWISHKIKDHFAKKDKIAINLKYIDPTYMIRAIPSNASDNVYCTLLAQSAVHGAMAGYTGFTVGLVNGRHTYIPFNRIIERQNKVVITDRMWARLLSSTNQPSFLSSKDLDEAKKAEQPPSQLLEGSNCTDTGEAEKKENTLTRLLEGDNFKDEPQSENHADNDIETIN* 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01711 551 Coils Coil 270 290 - -
Lapu9g01711 551 MobiDBLite consensus disorder prediction 513 551 - -
Lapu9g01711 551 Pfam Phosphofructokinase 123 434 IPR000023 GO:0003872|GO:0006096
Lapu9g01711 551 MobiDBLite consensus disorder prediction 488 551 - -
Lapu9g01711 551 Hamap ATP-dependent 6-phosphofructokinase [pfkA]. 24 487 IPR012004 GO:0003872|GO:0005524|GO:0006096
Lapu9g01711 551 SUPERFAMILY Phosphofructokinase 88 494 IPR035966 GO:0003872|GO:0006096
Lapu9g01711 551 FunFam ATP-dependent 6-phosphofructokinase 116 312 - -
Lapu9g01711 551 PRINTS ATP-dependent phosphofructokinase family signature 286 302 IPR022953 GO:0003872|GO:0006002|GO:0006096
Lapu9g01711 551 PRINTS ATP-dependent phosphofructokinase family signature 214 230 IPR022953 GO:0003872|GO:0006002|GO:0006096
Lapu9g01711 551 PRINTS ATP-dependent phosphofructokinase family signature 247 264 IPR022953 GO:0003872|GO:0006002|GO:0006096
Lapu9g01711 551 PRINTS ATP-dependent phosphofructokinase family signature 343 355 IPR022953 GO:0003872|GO:0006002|GO:0006096
Lapu9g01711 551 PRINTS ATP-dependent phosphofructokinase family signature 124 143 IPR022953 GO:0003872|GO:0006002|GO:0006096
Lapu9g01711 551 PRINTS ATP-dependent phosphofructokinase family signature 265 283 IPR022953 GO:0003872|GO:0006002|GO:0006096
Lapu9g01711 551 PIRSF ATP_PFK_TP0108 77 491 IPR012004 GO:0003872|GO:0005524|GO:0006096
Lapu9g01711 551 PIRSF ATP_PFK_TP0108 1 74 IPR012004 GO:0003872|GO:0005524|GO:0006096
Lapu9g01711 551 Gene3D - 117 312 - -
Lapu9g01711 551 PANTHER ATP-DEPENDENT 6-PHOSPHOFRUCTOKINASE 1 5 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01711 Lapu-Chr9 31935667 31942255 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01711 K00850 - gmx:100818755 937.562
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01711 9 31935667 31942255 Lapu9g01711 9 31935667 31942255 ECH