Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01700 ATGGCGTCTTCTAAGAGGCCAAATGCAGAGCCGAATGGGAAAGGGAAACGCCAAAAATCTTCCGGCGGGTTTTCCTCGTTGGATGTTTCTCCGGGAAGTGTTGTGTTCCGTTTGCTCTGTCCCGTTTCAAGAATAGGCAGTGTTATTGGCAAAGGCGGTGCCATCATTTCACAAATTCGACAAGAAACTGGTGTGAAGGTTAAGATTGAGGAAGCTATACCTGGGTGTGATGAAAGGGTTATCACTATCTCAGGTTCAGATAAAGAAGCCGAAGAAGATCATGTAGAGCAGGTAAGGGAGGTTAACAATGATGATGATGCTGGAATCGAGGGGAAGGGGGATGGGGAGGAGAAGGATGGTGGTGATGGTGATGATAATGAAGAGAAAGAAGATAAAAATTCTGTTACCGTCGAAGATTCTCCTAGTGAGAAGGGGAATTCGGCCATTCGTAAGGCTATATCACTAGTTTTTGAGAGAATGGTTGAGGGAGTAGAGGAAACAAGTGAAGGGGATGAAGAAAGTAGTAAATCTTCTTCCCTTGTTTTTAGGTTACTTATTCTTACCACTCAAGTTGGATGCCTTTTAGGAAAGGGTGGTAGTGTGATTAAGAGAATGGCTGCTGAGAGTGGGGCACATATTCGGATCCTTCCTAAAGACAAACTTCCAGTGTGTGCATCAGCTTCTGACGAGATAGTTCAGATCTCAGGAGGCGTAGACGTTGTCAGGAAAGCTCTTCAATCTGTTTCTCATCAGCTATTGGAAAATCCGCCACGGGATCATGAATTGTCCACTAATTTTAATGGACCTTCTCATTCATCTGGGAAGTTCCCGCCACACAGCCGTTCTTTTGGTGGTCAAGGAGTACCTTTTGCTGCTGGGCATGATATTTCTGTTTTTCATTCTGGCCCTCAATTGATTTCTAAGTTTCATGAAGCTGCCATTCATGGTCGCACGAGAGCTCTACAGGAAATGCTTACTTTTCGTTTATTGTGTCCTGTGGAAAGGGTAGGAAATGTAATTGGTAAAGGTGGAACAATCATAAAGACACTGCAGCAAGAGACAGTAAGTGAAATCAAGATTGTAGAAAGTCCACCAGATTCAGAGGACTGTGTTATTGTTATATCTGGTCCAGCGCACCCGGATGATAGAGTTTCCCCTGTGCAAGAGGCTGTATTTCGTGTGCAAACTAGAATAGCCAAGCCTATACTTGATGCCAAAGAGCATACTATGTTAGCAAGGTTTCTTGTTTCTTCCAATCAAATAGGTTGTCTCCTCGGCAAGGGTGGTTCCATCATAACTGAAATGAGGAAGAAATCAGGGGCCCATATCCGTATATTAGGAAAGGATAAGGTTCCAAAGTGTGCTTCAGAAGACGAAGAAGTAATTAAGGTAAATGGAGAAATTGAGGCAGTGCATGATGCTCTTATGCAAATAACCACTAGATTAAAACATCATTTCTTTCGTGATTCACATCCATCTGTCAATTATCCTTCAAATTCTCCCTTTGTGGATCAACTTCCTCCATTCCCACCTTATTTAGGAAGACGGGGACTGTCACCTCCTGGGATGTATTCTGACCTAGGTCCTCCACCTCCTCATGCGGGTTTCCCTCTTGATGATCGCCCTCCCTTTTTGAATAATATACATAGATCAGGCATTCCTCCTCACATATCTGAAAGGAAGCCTTGGGGTCCTCAGGGGATACTTGAAGGTGGCTCACGCATTGGCTTGCCAGACTTTCCCGGAGGTCCTCCTAGAAGAATTTCAGGATTTGCAGGGGGGAGCCAACCAATTATCACAAGTACCACTGTTGAAGTTGTTGTTCCTCGAGCACTGGTGCCTGTAATATATGGAGAAGATGGTGAATGCCTGAAACAAATACTTCAGATCTCTGATGCAAATATTACTATAACTGATCCAAAGCCTGGAGCTGTGGAAACTAAAATTATAATATCTGGAACACCAGAGCAAACTCATGCAGCCCAAAGTCTTATTCAGGCATTTGTCATGAGTGAGAGGGAGTCTGGTTGA 2031 0.4392 MASSKRPNAEPNGKGKRQKSSGGFSSLDVSPGSVVFRLLCPVSRIGSVIGKGGAIISQIRQETGVKVKIEEAIPGCDERVITISGSDKEAEEDHVEQVREVNNDDDAGIEGKGDGEEKDGGDGDDNEEKEDKNSVTVEDSPSEKGNSAIRKAISLVFERMVEGVEETSEGDEESSKSSSLVFRLLILTTQVGCLLGKGGSVIKRMAAESGAHIRILPKDKLPVCASASDEIVQISGGVDVVRKALQSVSHQLLENPPRDHELSTNFNGPSHSSGKFPPHSRSFGGQGVPFAAGHDISVFHSGPQLISKFHEAAIHGRTRALQEMLTFRLLCPVERVGNVIGKGGTIIKTLQQETVSEIKIVESPPDSEDCVIVISGPAHPDDRVSPVQEAVFRVQTRIAKPILDAKEHTMLARFLVSSNQIGCLLGKGGSIITEMRKKSGAHIRILGKDKVPKCASEDEEVIKVNGEIEAVHDALMQITTRLKHHFFRDSHPSVNYPSNSPFVDQLPPFPPYLGRRGLSPPGMYSDLGPPPPHAGFPLDDRPPFLNNIHRSGIPPHISERKPWGPQGILEGGSRIGLPDFPGGPPRRISGFAGGSQPIITSTTVEVVVPRALVPVIYGEDGECLKQILQISDANITITDPKPGAVETKIIISGTPEQTHAAQSLIQAFVMSERESG* 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01700 676 ProSiteProfiles Type-1 KH domain profile. 601 665 - -
Lapu9g01700 676 Pfam KH domain 326 378 IPR004088 GO:0003723
Lapu9g01700 676 Pfam KH domain 36 92 IPR004088 GO:0003723
Lapu9g01700 676 Pfam KH domain 603 666 IPR004088 GO:0003723
Lapu9g01700 676 Pfam KH domain 413 478 IPR004088 GO:0003723
Lapu9g01700 676 Pfam KH domain 183 248 IPR004088 GO:0003723
Lapu9g01700 676 Gene3D K Homology domain, type 1 600 673 IPR036612 GO:0003723
Lapu9g01700 676 MobiDBLite consensus disorder prediction 14 28 - -
Lapu9g01700 676 ProSiteProfiles Type-1 KH domain profile. 324 391 - -
Lapu9g01700 676 MobiDBLite consensus disorder prediction 253 279 - -
Lapu9g01700 676 MobiDBLite consensus disorder prediction 84 146 - -
Lapu9g01700 676 CDD KH-I_PEPPER_rpt1_like 34 87 - -
Lapu9g01700 676 PANTHER KH DOMAIN CONTAINING RNA BINDING PROTEIN 319 665 - -
Lapu9g01700 676 SMART kh_6 323 399 IPR004087 GO:0003676
Lapu9g01700 676 SMART kh_6 32 102 IPR004087 GO:0003676
Lapu9g01700 676 SMART kh_6 600 670 IPR004087 GO:0003676
Lapu9g01700 676 SMART kh_6 178 253 IPR004087 GO:0003676
Lapu9g01700 676 SMART kh_6 408 483 IPR004087 GO:0003676
Lapu9g01700 676 CDD KH-I_PEPPER_rpt2_like 181 249 - -
Lapu9g01700 676 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 601 670 IPR036612 GO:0003723
Lapu9g01700 676 MobiDBLite consensus disorder prediction 1 28 - -
Lapu9g01700 676 CDD KH-I_PEPPER_rpt1_like 325 392 - -
Lapu9g01700 676 ProSiteProfiles Type-1 KH domain profile. 33 102 - -
Lapu9g01700 676 Gene3D K Homology domain, type 1 407 485 IPR036612 GO:0003723
Lapu9g01700 676 Gene3D K Homology domain, type 1 32 105 IPR036612 GO:0003723
Lapu9g01700 676 CDD KH-I_PEPPER_rpt2_like 411 482 - -
Lapu9g01700 676 ProSiteProfiles Type-1 KH domain profile. 179 248 - -
Lapu9g01700 676 Gene3D K Homology domain, type 1 323 401 IPR036612 GO:0003723
Lapu9g01700 676 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 169 259 IPR036612 GO:0003723
Lapu9g01700 676 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 323 403 IPR036612 GO:0003723
Lapu9g01700 676 ProSiteProfiles Type-1 KH domain profile. 409 478 - -
Lapu9g01700 676 MobiDBLite consensus disorder prediction 84 138 - -
Lapu9g01700 676 Gene3D - 120 256 - -
Lapu9g01700 676 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 29 90 IPR036612 GO:0003723
Lapu9g01700 676 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 405 487 IPR036612 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01700 Lapu-Chr9 31823116 31828823 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01700 K21444 - gmx:100777433 1087.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01700 9 31823116 31828823 Lapu9g01700 9 31823116 31828823 ECH