Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01690 ATGTGTAATCCCAAACCATCCTCATCGTCCCCATTTCTGTGTTCCACAAAAGCCCACACCATAACTCTCGACCCCAAACTCAAAAATCACCCTCCCGTTCATGATCAACTTCAAGATGAACTTCACAGATGGCCAACTCCGAAGGAGGTGATAGCAGAAATGAAGGCCTTGGGGAAGATATCAGGGCCAACAGCAGTGACGGGGTTACTCTTATATTCAAGAGCCATGATCTCAATGCTCTTCCTAGGCTACCTCGGGGAGATGGAGCTGGCCGGAGGGTCTCTATCCATCGGCTTCGCCAACATCACCGGCTACTCCGTCATCTCAGGTCTTGCCATGGGAATGGAACCCATTTGCGGCCAAGCCTACGGCGCAAAACAGTGGAAAACGCTGGGCTTAACCCTCCAGAGAACCGTCCTCCTCCTCCTCTCCACCTCCATCCCCATCTCCCTCACCTGGCTCAACATGAAGTCCATACTCTTATGGTGCGGCCAAGACCACCAGATATCCTCCACCGCCCAAACCTTCATCCTCTTCTCCATCCCAGACCTCTTCCTCCTCTCCCTCCTCCACCCTCTCCGCATCTACCTCCGAACACAAAGCATCACATTACCCCTAACCTACTGCTCCGCCCTTTCCCTCCTCCTCCACCTCCCCCTCAACTTCCTCCTTGTCGTCCACTTCAAAATGGGGGTCTCCGGCGTCGCCATAGCCATGGTATGGACCAACCTCAACCTCTTCCTCTTCCTCTCCTCCTTCGTCTACTTCTCCGGAGTCTACAAAGACTCCTGGGTCCCCCCCAGCTCCGACTGCCTCCGCGGCTGGTCCTCCCTACTTGCACTTGCTGTTCCCACCTGCGTCTCCGTCTGCCTCGAATGGTGGTGGTATGAACTCATGATAATCCTCTGTGGGCTACTCCTCAACCCCAAAGCCACCATTGCTTCCATGGGAATCCTCATCCAGACCACCTCCCTCGTCTACGTCTTCCCCTCCTCCCTCAGCCTCGGCGTCTCCACCCGCGTCGGCAACGAGCTCGGTGCCAACCGCCCCGCCAGAGCCCGCATTTCCATGATAGTCTCACTCGCCTGCGCCGTCGCGCTCGGCGTCGCTGCCATGGCTTTCACCACCCTCATGCGACACCAATGGGGCAGATTCTTCACCGCTGACACAGAAATTCTTAACCTCACGGCCTCCGTGCTCCCAATCGTGGGCCTCTGCGAGCTCGGCAACTGCCCGCAGACCACGGGCTGCGGCGTCCTCCGCGGCAGCGCCCGGCCCACCGTCGGAGCCAACATCAATCTGGGCTCGTTTTATTTGGTAGGCATGCCCGTGGCTGTTCTTCTCGGTTTCGTTGCGAAAATGGGTTTCCCTGGGCTCTGGCTTGGGTTGCTTGCGGCTCAAGCCTCTTGTGCTTCTCTGATGATATTCGTTCTCTGCACCACAGACTGGAACGCTCAAGTGCAAAGGGCCAATGACCTTACTTCTGCTAATTCTGCTCCTCCCAACTTACCTACCACTTTTACGCCAACACCACTCTCTCACCATGTTTCTCTTCCACAGATTCTTCCCACCCATGATCACCTTCCCCCCGCACCCTCTCTTGAAACAGACCCTCTCATTATACACACTATTAATTAA 1638 0.5598 MCNPKPSSSSPFLCSTKAHTITLDPKLKNHPPVHDQLQDELHRWPTPKEVIAEMKALGKISGPTAVTGLLLYSRAMISMLFLGYLGEMELAGGSLSIGFANITGYSVISGLAMGMEPICGQAYGAKQWKTLGLTLQRTVLLLLSTSIPISLTWLNMKSILLWCGQDHQISSTAQTFILFSIPDLFLLSLLHPLRIYLRTQSITLPLTYCSALSLLLHLPLNFLLVVHFKMGVSGVAIAMVWTNLNLFLFLSSFVYFSGVYKDSWVPPSSDCLRGWSSLLALAVPTCVSVCLEWWWYELMIILCGLLLNPKATIASMGILIQTTSLVYVFPSSLSLGVSTRVGNELGANRPARARISMIVSLACAVALGVAAMAFTTLMRHQWGRFFTADTEILNLTASVLPIVGLCELGNCPQTTGCGVLRGSARPTVGANINLGSFYLVGMPVAVLLGFVAKMGFPGLWLGLLAAQASCASLMIFVLCTTDWNAQVQRANDLTSANSAPPNLPTTFTPTPLSHHVSLPQILPTHDHLPPAPSLETDPLIIHTIN* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01690 545 CDD MATE_eukaryotic 53 489 IPR045069 GO:0042910|GO:1990961
Lapu9g01690 545 Pfam MatE 284 447 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lapu9g01690 545 Pfam MatE 63 223 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lapu9g01690 545 PANTHER MULTIDRUG RESISTANCE PROTEIN 48 483 - -
Lapu9g01690 545 NCBIfam MATE family efflux transporter 75 460 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01690 Lapu-Chr9 31688871 31690723 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01690 K03327 - gmx:100788339 857.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01690 9 31688871 31690723 Lapu9g01690 9 31688871 31690723 ECH