Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01689 ATGGCCTCGTTTCGGCGGACTCTGTCGCCGGCGTATCCCGATCGCCAGTACCTAAACGGTTCGATTCCAGTTTCCTCCCCGACGCATAAGCTCCCGTCCTCGAACGCCAAGTACTCGTCGCCACTTCCTGCGCTTGCGGCGTCGTTCCGGCGACTCGTCGGCGGCGTGTTCACGCGCCGGCACGGTCGGAAAGGGCAGTGGAGACGGGCGGCGTTCAGGTGCGTGCTGTGCTTCTTCGTAGGGTTCTTGCTAGGCATGTTCCCGTTCGGCCACATGGCGGAGGACATTCGGTCGCACGAAATCTCGTTCGAGATGAAATCGCCGCTGCCGCACGCGAACAACGCGCAGCAGCTGCTCCAGGAAGATCGCGTTCGGCGGAATCGCGTCGAGGAGGGTTTCGTGATCGATCCGGTGAGCCTAAGCGCGGAGAGGGAGAGGCAGAGCGATAGGTTCGATTTTGTGCCGAGGAAGCCGCTGATTGTGGTGACGCCGACGTACGGCCGTGCCTTTCAGGCGTATTTCCTGAACCGGTTGGGGCAGGTGCTGCGGCTGGTACCGCCGCCGGTGGTGTGGATTGTGGTGGAGATGAAGGTGGCATCGATGGAGACGGCGGAGGTACTGAGGAAGACGGGCGTGATGTATAGGCATTTAGTGTGCAATAAGAATTTGACGGATGTGAAGGACAGGGGGGTTCATCAGCGGAACACAGCGTTGGAACACATTGAGCGTCATAGGCTCGATGGGATTGTTTACTTTGCGGACGATGATAATGTGTATTCTCTTGAGTTGTTTGACGCCTTGAGAGACATCAGTTGGTCTCTCATGATGGTTTGCAATTTGCAATTTTCATCTGATCCGTGTTATCTTGCATTTCTGGAGTGCCGCTTTGGCACTTGGCCTGTTGCCATGCTTGCACCAAGCAAGAACAAGGCCATTTTGGAGGGTCCTGTATGCAATACAAGCCAAGTGATCGGATGGCATACAAATGAGAAAAGTAAAAGACTTCGTAGATTTCATGTTGATATGTCTGGATTTGCATTCAACAGCACAATCTTGTGGGATTCAAAAAGATGGCGACGCCCTTCCTCAAATCCCATACGACAGTTAGACACTGTGAAGGAAGGTTTTCAAGAGACTACCTTTATAGAACAACTGGTGGAAGATGAAAGTCAAATGGAAGGTTCACCTCTTGGTTGTTCAAAAATAATGAATTGGCATCTCCATTTGGGTGCTCATAATATAGTTTACCCAAAAGGTTGGGTGCTTCCGAAAAACCTAGATGCTGTGATACCTGTCAAATAA 1302 0.523 MASFRRTLSPAYPDRQYLNGSIPVSSPTHKLPSSNAKYSSPLPALAASFRRLVGGVFTRRHGRKGQWRRAAFRCVLCFFVGFLLGMFPFGHMAEDIRSHEISFEMKSPLPHANNAQQLLQEDRVRRNRVEEGFVIDPVSLSAERERQSDRFDFVPRKPLIVVTPTYGRAFQAYFLNRLGQVLRLVPPPVVWIVVEMKVASMETAEVLRKTGVMYRHLVCNKNLTDVKDRGVHQRNTALEHIERHRLDGIVYFADDDNVYSLELFDALRDISWSLMMVCNLQFSSDPCYLAFLECRFGTWPVAMLAPSKNKAILEGPVCNTSQVIGWHTNEKSKRLRRFHVDMSGFAFNSTILWDSKRWRRPSSNPIRQLDTVKEGFQETTFIEQLVEDESQMEGSPLGCSKIMNWHLHLGAHNIVYPKGWVLPKNLDAVIPVK* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01689 433 CDD GlcAT-I 157 409 IPR005027 GO:0015018|GO:0016020
Lapu9g01689 433 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 66 427 IPR005027 GO:0015018|GO:0016020
Lapu9g01689 433 Pfam Glycosyltransferase family 43 178 272 IPR005027 GO:0015018|GO:0016020
Lapu9g01689 433 Pfam Glycosyltransferase family 43 295 408 IPR005027 GO:0015018|GO:0016020
Lapu9g01689 433 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 158 421 IPR029044 -
Lapu9g01689 433 SUPERFAMILY Nucleotide-diphospho-sugar transferases 158 426 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01689 Lapu-Chr9 31649640 31653961 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01689 1 433 Glycosyltransferase AT1G27600 58.661 2.10e-175 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01689 K20869 - gmx:100809892 752.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01689 9 31649640 31653961 Lapu9g01689 9 31649640 31653961 ECH