Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01630 ATGGAGCCCGACGAGAAAAAAGCAATGATTCGCGATATCGTGCTACAAGTCTTTGTCATCTCCATCGCCATATTCTCCTTCCTCTGGATGCACGGCATTCCCCAGCGTCTCTACGCCAAACTCCGCCACCGTCCCCCAAACCCACGCGCCGTCCAAGCCAAAGGCCACTTCATCAAAGGCGCGCAACTCGTCGCGCAAGCCAGAAGATCCAAAACCGCCTCCGTCACAACCTCCCTCGCCAAACAGGCCTTAGCGGAAGCCGAGAAGGCCATCGAGCTCGATCCAAAGGACGCCGCCTCGCACTTCTTGAAGTCCATGGCGCTCGATCTCCAGGGCTTCCGCGGCAACGCGCTCGACGCACTCGACGCCGCGCTGTCTCCGCTCGCAGCGGCGTCGCTGGCGGCCGATGAGAGAGGCGACGCGCTGCTGAAGCGAGCGGAGCTGAAGATCGCGTTGAGCGAGCGGCGCGTTGACTCGGTGCTGGCGGATTTGAACGAGTCGGTGAAGCTGAGTCCGCGGAACGCGAAAGCGTGGTGCATGTTGGGAGAGTGTTACGAGGGAAATGAGATGGGAGAGGAAGCGAAGAAGGCTTATAAAGAGGCTCTCGAATTGGAGCCGCAACTGAATGTGGCTCAAGAAGCTCTCAACAGGTTGAGTTCGTCGTAG 666 0.5931 MEPDEKKAMIRDIVLQVFVISIAIFSFLWMHGIPQRLYAKLRHRPPNPRAVQAKGHFIKGAQLVAQARRSKTASVTTSLAKQALAEAEKAIELDPKDAASHFLKSMALDLQGFRGNALDALDAALSPLAAASLAADERGDALLKRAELKIALSERRVDSVLADLNESVKLSPRNAKAWCMLGECYEGNEMGEEAKKAYKEALELEPQLNVAQEALNRLSSS* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01630 221 Pfam Tetratricopeptide repeat 175 207 IPR001440 GO:0005515
Lapu9g01630 221 Coils Coil 143 163 - -
Lapu9g01630 221 SMART tpr_5 175 208 IPR019734 GO:0005515
Lapu9g01630 221 Gene3D Tetratricopeptide repeat domain 41 131 IPR011990 GO:0005515
Lapu9g01630 221 ProSiteProfiles TPR repeat profile. 175 208 IPR019734 GO:0005515
Lapu9g01630 221 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 6 80 212 - -
Lapu9g01630 221 Gene3D Tetratricopeptide repeat domain 132 221 IPR011990 GO:0005515
Lapu9g01630 221 SUPERFAMILY TPR-like 81 214 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01630 Lapu-Chr9 31060113 31061197 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01630 - - vum:124835704 345.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01630 9 31060113 31061197 Lapu9g01630 9 31060113 31061197 ECH