Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01616 ATGGAAAACATTTGCAACGAAGAAGAAAACCATCCTCTCATAAAGTCAACATCGCAAAACGGATCCAACAATAACACTCGCTCTCTCTTCCACCGATCATGTTCCGAATCCAAGAGCCTATGGCAAATCGCCGCCCCTTCAATCTTCACTCGCCTCGCCATGTTCTCCATCACCGTCGTCACCCAGTCATTCGCCGGCCACCTCGCCGACCTCGATCTCGCCGCCATTTCCATCGCCTGCACCGTCCTCATCTCCATTACCTTCGGTTTCATGTTGGGTATGGCGAGTGCGCTTGAGACGCTTTGCGGCCAGGCCTACGGCGCTGGACAGCACCGCATGTTGGGCGTTTACCTGCAACGCTCGTGGGTTGTTCTTTCCCTGTCCTCCCTTCTGATGCTGCCGGTGTTCCTGTTCGCGACGCCGCTGTTGAAGTTGGTGGGACAGCCCGTCGCGGTGGCGGAGCAGGCGGGGCTGGTGGCGGTCTGGTTGATCCCGTTTCACCTCAGTTTCCCGTTTCAGTTCACGTTGCAGCGGTTCCTGCAGTGCCAATTGAAGACCGGTATCGTTGCTTGGGTTTCAGGGGTGGCTCTTGCTATTCATATTTTAGTTAGTTGGATTTTTGTTTATAGGATGAGAATTGGGATCGTTGGCACTGCACTTTCCATTGGTTTCTCGTGGTGGCTCTCAGTTTTGGGAATGCTCGGGTATACACTCTTTGGTGGGTGCCCGTTTTCGTGGACTGGTTTTTCTGCTGAAGCTTTTGCTGGTCTCTGGCAATTCTTTAAACTCTCTTTGGCTTCTGGGGTCATGCTTGCGTTAGAGAATTTCTATTACAGACTGTTGCTTATAGTCTCTGGATATATGCATAACACTGAGATTGCAATTGATGCTCTTTCCGTTTGTGTTACTGTATATGGCTGGGAATCCATGATACCGCTTGCATTTTTGGGTGCAACCGGGGTTCGCGTCGCAAACGAGCTTGGGGCGGGCAATGCAACAGGTGCAAAATTTGCAAGTGCGGTTTCTGTGGTAAATACTGTACTGGTGGGATTTATATTTTGGTTGGTAATTGTTTTCTTCAACAAGAATCTTGCCTTGATCTTTACATCGAGCTCGTCCGTTATCCAAATGGTCAATGACCTGTCAGTGTTGTTAGCTTTTACTGTTCTTCTTAATTGCATTCAACCAGTTCTATCAGGGGTGGCAATAGGATCTGGTGGTCAAGCAGTAGTGGCATATATAAACATTGGCAGTTACTACTTGGTCGGAATACCTCTGGGGGTCCTCCTAGGCTGGTTGCTTCCTTCGGGTATTGTTGGAATGTGGAGTGGAATGATGAGTGGAACGGTGGTTCAAACATTGATCTTGGCTGTTATTACAATGAGATATGATTGGGAAAAAGAGTCATGTGGTTACTTGTGGTTTGTAGGTTCGGAAAGCTCAAATTCTTATTAA 1455 0.4852 MENICNEEENHPLIKSTSQNGSNNNTRSLFHRSCSESKSLWQIAAPSIFTRLAMFSITVVTQSFAGHLADLDLAAISIACTVLISITFGFMLGMASALETLCGQAYGAGQHRMLGVYLQRSWVVLSLSSLLMLPVFLFATPLLKLVGQPVAVAEQAGLVAVWLIPFHLSFPFQFTLQRFLQCQLKTGIVAWVSGVALAIHILVSWIFVYRMRIGIVGTALSIGFSWWLSVLGMLGYTLFGGCPFSWTGFSAEAFAGLWQFFKLSLASGVMLALENFYYRLLLIVSGYMHNTEIAIDALSVCVTVYGWESMIPLAFLGATGVRVANELGAGNATGAKFASAVSVVNTVLVGFIFWLVIVFFNKNLALIFTSSSSVIQMVNDLSVLLAFTVLLNCIQPVLSGVAIGSGGQAVVAYINIGSYYLVGIPLGVLLGWLLPSGIVGMWSGMMSGTVVQTLILAVITMRYDWEKESCGYLWFVGSESSNSY* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01616 484 Pfam MatE 268 428 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lapu9g01616 484 Pfam MatE 46 206 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lapu9g01616 484 PANTHER MULTIDRUG RESISTANCE PROTEIN 31 465 - -
Lapu9g01616 484 MobiDBLite consensus disorder prediction 10 24 - -
Lapu9g01616 484 CDD MATE_eukaryotic 36 470 IPR045069 GO:0042910|GO:1990961
Lapu9g01616 484 NCBIfam MATE family efflux transporter 46 442 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lapu9g01616 484 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01616 Lapu-Chr9 30846549 30862125 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01616 K03327 - gmx:100814869 800.816
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01616 9 30846549 30862125 Lapu9g01616 9 30846549 30862125 ECH