Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01610 ATGGCATCCACCACTGCTTTGGTTTTGGGCTCATTCATAGCAATCACCATGGCCCTGCCAACCCTCGCAACCGTTCACACCGTGGGAGATTCTTCAGGTTGGGCAATTGGTGCTGATTATAGTTCATGGACTGGTGACAAGACCTTCTCAGTGGGTGATAGTCTCGTGTTCAACTATGGAGCTGGGCACACAGTGGATGAAGTTAAAGAGAGTGACTACAAATCATGCACCTCAGGGAATTCAATTAGTACAGACAGTAGTGGAGCAACAACAATTGCCCTCAAGACTGCAGGCACTCATTACTTTATATGTTCTGTTCCTGGACATTGTTCTGGTGGCATGAAACTTGCCGTCACTGTCAAAGCAGGAAAAGACACCACTCCTTCAACTGGGAAGGCTTCACCTTCTGATGGCACAGCCACCACAGCCACACCAACCACCACCACCACCACCACCACAACCACTGCTGCTAAATCAAACTCGGCTTCAACAAGTAGTGTGACATCAATTTTTACCATGTTGATTGTTTCGTGGATCTCTTACCATGTCTTGCCCCTGGTGTAA 564 0.4787 MASTTALVLGSFIAITMALPTLATVHTVGDSSGWAIGADYSSWTGDKTFSVGDSLVFNYGAGHTVDEVKESDYKSCTSGNSISTDSSGATTIALKTAGTHYFICSVPGHCSGGMKLAVTVKAGKDTTPSTGKASPSDGTATTATPTTTTTTTTTTAAKSNSASTSSVTSIFTMLIVSWISYHVLPLV* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01610 187 ProSitePatterns Type-1 copper (blue) proteins signature. 98 114 IPR028871 -
Lapu9g01610 187 MobiDBLite consensus disorder prediction 125 159 - -
Lapu9g01610 187 CDD Phytocyanin 24 120 - -
Lapu9g01610 187 SUPERFAMILY Cupredoxins 23 120 IPR008972 -
Lapu9g01610 187 Gene3D - 22 127 IPR008972 -
Lapu9g01610 187 ProSiteProfiles Phytocyanin domain profile. 24 122 IPR003245 GO:0009055
Lapu9g01610 187 FunFam Blue copper 22 126 - -
Lapu9g01610 187 PANTHER BLUE COPPER PROTEIN 23 153 IPR039391 GO:0009055
Lapu9g01610 187 Pfam Plastocyanin-like domain 34 114 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01610 Lapu-Chr9 30783178 30784459 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01610 34 120 Miscellaneous Gene Families AT1G22480 72.414 3.01e-38 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01610 - - var:108331136 282.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01610 9 30783178 30784459 Lapu9g01610 9 30783178 30784459 ECH