Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01607 ATGTTTCGAGGGATGAGCCTTCAGGCTCCCATTACTCGGTGTTTGTGTTTCAAACCAAAACAAAAAACAAACACTACAAATAAGCTGCCAACGCTACACTTTCGCACTGGCAGCCGCCGCCAAGGATATACTACAACCGTCACAAACGCGATGGCGCTTTCTTTTGAGATTCTCGGCAGATATAACCTTGCTCGGGCTGCTCGGTTGACACTCCCTCATCATGTGTGCCAAACTCCTTTGTTTATGCCTGTGGGCACGCAAGGAACAATAAAGGGATTGACAAATAGCCAGCTTGAGGATATTGGTTGCCAAATAATACTTGGAAATACTTATCACTTGGCCCTTCGACCTACTTCTGAACTTCTTGATGAAGTTGGTGGCCTTCATAATTTTATGAATTGGCAACGGGGTCTGCTTACAGACTCTGGTGGCTTTCAAATGGTTTCCCTGTTGCATCTTGCTGATATCACAGAAAAAGGTGTGACATTTCAGTCACCAGTTGATGGAAAGCCGATGCTTCTAACACCTGAGGAATCAATTCAAATCCAAAATAGAATTGGAGCAGATATCATTATGGCTCTCGATGATGTTGTAAAGACCACCATTACTGGCCCACGAATTGAGGAAGCTATGTATCGAACACTTCGATGGATAGACAGATGTATAGTAGCTCACAAGAGACCTCATGATCAAAACTTATTTGGTATTGTGCAAGGTGGTTTAGATCCTAGATTGAGGGATATCTGTGTCAGAGGTTTGGTGGAGCGCAATTTGCCTGGCTATGCTATTGGTGGTCTTTCAGGCGGTGAAGATAAAAATTCATTTTGGCGAATTGTTGCTCAGTGCACTGCTGCTTTGCCAGACCATAAACCGCGATATGTTATGGGAGTTGGTTATCCTCTTGATATCGTTGTTTGTAGTGCTTTGGGTGCTGATATGTATGACTGCGTATATCCTACCCGTACAGCACGCTTTGGCACTGCTCTTGTTCCTGAGGGAGTATTGAAATTAAAACACAAAGCAATGGCTGATGACACCCGTCCAATTGATCCTAGTTGCCCTTGTATGGTTTGCAAGAACTATACCAGGGCTTACATCCATTGCCTTGTGACAAAAGATGCAATGGGATCTCAACTTTTGTCGTATCATAATTTATACTACATGCTGCAGCTCAGTAGGAATCTACACTCTTCAATAGTTGAAGGAAGGTTTCCAGAGTTTGTATGTGACTTTCTACACAAAATGTTTCCGAAAGGTGATGTTCCTGAATGGGTCTGCGATGCTATGGAGGTGGCTGGAATCGACATTTCTTCCTGCTGTGCTCCATTTTCTTCATGCCAAGAACATGATTCTAAAAGCATGCCCGAAGAAGTTAGTTTAGCGAGGTAA 1389 0.4348 MFRGMSLQAPITRCLCFKPKQKTNTTNKLPTLHFRTGSRRQGYTTTVTNAMALSFEILGRYNLARAARLTLPHHVCQTPLFMPVGTQGTIKGLTNSQLEDIGCQIILGNTYHLALRPTSELLDEVGGLHNFMNWQRGLLTDSGGFQMVSLLHLADITEKGVTFQSPVDGKPMLLTPEESIQIQNRIGADIIMALDDVVKTTITGPRIEEAMYRTLRWIDRCIVAHKRPHDQNLFGIVQGGLDPRLRDICVRGLVERNLPGYAIGGLSGGEDKNSFWRIVAQCTAALPDHKPRYVMGVGYPLDIVVCSALGADMYDCVYPTRTARFGTALVPEGVLKLKHKAMADDTRPIDPSCPCMVCKNYTRAYIHCLVTKDAMGSQLLSYHNLYYMLQLSRNLHSSIVEGRFPEFVCDFLHKMFPKGDVPEWVCDAMEVAGIDISSCCAPFSSCQEHDSKSMPEEVSLAR* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01607 462 NCBIfam tRNA-guanine transglycosylase 55 415 IPR002616 GO:0006400|GO:0016763
Lapu9g01607 462 PANTHER QUEUINE TRNA-RIBOSYLTRANSFERASE CATALYTIC SUBUNIT 1 47 439 - -
Lapu9g01607 462 NCBIfam tRNA guanosine(34) transglycosylase Tgt 56 415 IPR004803 GO:0008479|GO:0101030
Lapu9g01607 462 Hamap Queuine tRNA-ribosyltransferase [tgt]. 53 414 IPR004803 GO:0008479|GO:0101030
Lapu9g01607 462 Pfam Queuine tRNA-ribosyltransferase 64 415 IPR002616 GO:0006400|GO:0016763
Lapu9g01607 462 SUPERFAMILY tRNA-guanine transglycosylase 51 414 IPR036511 GO:0006400|GO:0016763
Lapu9g01607 462 Gene3D - 50 417 IPR036511 GO:0006400|GO:0016763
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01607 K00777 - gmx:100819664 860.522
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01607 9 30737103 30745812 Lapu9g01607 9 30737103 30745812 ECH