Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01600 ATGGCCACCGCCGCTTCCAACTCTCTTCTTCAAACCAAATCCATTCTCCCAACCCACCCTCTCCTCCCTTCCTCCACCACCCAATGCTACTCCGTTCCCGGGCCCAGGCCCAGGCCCAAGCCCAGGCCCATCCAATCCGTTCACGCGGCCGACAATCCCGTCAACGTAGTAGCCGACGGGAAACAGCCGCAACCGAGGCGTGAGGCCAAGTGGGCCGTGGACAGCTGGAAGTCCAAAAAGGCCCTCCAGCTCCCGGAATACCCGAACCAAGAGAAGCTCCAGGCGGTGCTAAAGAGCCTTGAAACGTTCCCTCCCATCGTCTTCGCTGGAGAGGCTCGCAACCTGGAGGAGCGCCTTGCCGAAGCCGCCATGGGGAACGCGTTCCTCCTCCAGGGCGGAGACTGCGCCGAGAGCTTCAAGGAGTTTCACGCGAACAACATCCGCGACACCTTCAGAATCCTCCTCCAGATGAGCGTGGTTATGATGTTCGGTGGCCAGATGCCCGTTATTAAGGTGGGACGAATGGCGGGTCAGTTCGCGAAACCGAGATCGGAGCAGTTGGAGGAGAAGAACGGGGTGAAACTCCCCAGTTACAGAGGCGATAACGTGAACGGAGATGCGTTCGAGGAGAAAGCCAGAATTCCTGATCCTGAAAGAATGATTAGAGCGTATAGTCAATCCGCTGCCACTCTGAATCTTCTGAGGGCATTTGCAACGGGAGGCTACGCTGCTATGCAAAGGGTTGGTCAATGGAATTTGGACTTCACAGAGCACAGTGAGCAAGGAGACAGGTACCTAGACTTTGCACACAGAGTGGATGAGGCCCTTGGTTTCATGGCTGCTGCAGGCCTCACGGTGGAGCATCCTATAATGAAAACAACCGAGTTCTGGACTTCACATGAATGTCTGTTATTGCCATATGAGCAATCACTCACCAGGTTGGATTCAACTTCGGGTCTCTACTATGACTGTTCCGCGCATATGCTTTGGGTTGGGGAACGGACCAGGCAGCTGGATGGTGCTCATGTTGAGTTTCTAAGAGGTGTTGCTAATCCTCTTGGAATCAAGGTGAGTGATAAGATGGATCCAAATGAGCTTGTTAGACTGATCAACATCTTGAACCCCCAAAACAAACCAGGGAGAATAACTGTGATAACGAGGATGGGAGCTGAAAATATGAGGGTCAAGCTTCCACATCTGATCAGGGCAGTACGCAGAGCTGGACACACTGTAACTTGGGTCAGTGATCCTATGCATGGAAACACCATAAAGGCTCCGTGTGGACTCAAAACTCGCCCCTTTGATGCCATCCGGGCAGAGGTGAAAGCATTCTTCGACGTGCATGAACAGGAAGGAAGCCACCCAGGAGGGGTTCATCTAGAGATGACGGGTCAGAATGTGACTGAGTGCATTGGTGGGGCAAGAACTGTGACCTTTGATGATCTGGGCTCACGTTACCACACACACTGCGATCCCAGGCTTAATGCTTCACAATCTCTCGAGCTGGCTTTCATCATTTCTGAACGCCTCCGAAAGCGTAGGATCGGATCGGATCGCGGCAGTACCTTTTCTCTATGTAAAAGAAAGGGTTTTAAAATAAAAGTGTCTCTCTGTCATCACTCATAA 1626 0.5264 MATAASNSLLQTKSILPTHPLLPSSTTQCYSVPGPRPRPKPRPIQSVHAADNPVNVVADGKQPQPRREAKWAVDSWKSKKALQLPEYPNQEKLQAVLKSLETFPPIVFAGEARNLEERLAEAAMGNAFLLQGGDCAESFKEFHANNIRDTFRILLQMSVVMMFGGQMPVIKVGRMAGQFAKPRSEQLEEKNGVKLPSYRGDNVNGDAFEEKARIPDPERMIRAYSQSAATLNLLRAFATGGYAAMQRVGQWNLDFTEHSEQGDRYLDFAHRVDEALGFMAAAGLTVEHPIMKTTEFWTSHECLLLPYEQSLTRLDSTSGLYYDCSAHMLWVGERTRQLDGAHVEFLRGVANPLGIKVSDKMDPNELVRLINILNPQNKPGRITVITRMGAENMRVKLPHLIRAVRRAGHTVTWVSDPMHGNTIKAPCGLKTRPFDAIRAEVKAFFDVHEQEGSHPGGVHLEMTGQNVTECIGGARTVTFDDLGSRYHTHCDPRLNASQSLELAFIISERLRKRRIGSDRGSTFSLCKRKGFKIKVSLCHHS* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01600 541 NCBIfam 3-deoxy-7-phosphoheptulonate synthase class II 71 514 IPR002480 GO:0003849|GO:0009073
Lapu9g01600 541 SUPERFAMILY Aldolase 63 511 - -
Lapu9g01600 541 MobiDBLite consensus disorder prediction 16 43 - -
Lapu9g01600 541 FunFam Phospho-2-dehydro-3-deoxyheptonate aldolase 260 512 - -
Lapu9g01600 541 Gene3D Aldolase class I 257 512 IPR013785 -
Lapu9g01600 541 PANTHER PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE 1, 2 44 517 IPR002480 GO:0003849|GO:0009073
Lapu9g01600 541 Pfam Class-II DAHP synthetase family 71 507 IPR002480 GO:0003849|GO:0009073
Lapu9g01600 541 MobiDBLite consensus disorder prediction 16 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01600 Lapu-Chr9 30648734 30653643 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01600 K01626 - gmx:100797019 865.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01600 9 30648734 30653643 Lapu9g01600 9 30648734 30653643 ECH