Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01596 ATGTCCAGGCCTCTACACAGAGGGGTATCTATTCGGATCCCTGAAAGAAACAATGACTCGTTGGACTCTCAATCCAAAGATAAGACGGAAAAGGAAGGTTTTGATAGAAGATTTTCCTCTGCTCACCCTTCACCCTTGAGGTCTCCCTATAGGGTGCTTTTATCTGATAATTCTAGTTCCAAATTAGGCATCACTGAGAATGGTTTATCATCTGACCCCTACATTATTGGCACTCCAAGAAATAGGCATAAGTTGGTTCTTTTTTTCTTGAAGTTTAGTTTAGTGTTTGTAGTTATTCTTGCTCTTGCGGGGTCTTTTTGGTGGACAATCTCAATTTCAACTGCGTCAAGGGGTCACATTTACCATGGTTATAGAAGACTCCACGAGCAACTTGTATCGGACCTGTTGGATATAGGGGAGATATCTTATGCTCCCTCAAGGCTGAAAGAACTGGAATTTTGTTATCAGGAGTTTGAAAATTATGTTCCTTGCTTTAATGTTTCTGACAATCTAGCTCTTGGTTTTACTGATGGCAATGAGTTTGACCGGCAATGCGGCCATGAGCTCAGGCAAGATTGCTTATCACTCTCACCACCAAATTACAAAATTCCTCTTAGGTGGCCTACTGGAAGGGATATTATCTGGGTTGCTAATGTTAAACTCACTGCACAGGAGGTTCTTTCTTCTGGAAGCTTGACCAAAAGGATGATGATGCTTGATGAAGAGCAAATTTCCTTTCGCTCAGCCTCTCATATGTTTGATGGTGTTGAAGACTATTCACATCAAATTGCTGAAATGATTGGGCTCAGAAATGAATCTAACTTCATACAAGCAGGGGTTAGAACAATACTGGATATTGACTGTGGTTACGGTAGCTTTGGAGCACACCTCTTTCAGAATCAGCTTCTAACTATGTGCATTGCAAGCTATGAGCCTTCTGGCAGTCAAGTTCAACTTACACTTGAGAGGGGTCTTCCTGCTATGGTTGCTTCTTTCAATTCAAAACAATTGCCATATCCATCTCTCTCCTTTGACATGTTGCATTGTGCCAGATGCGGCATTGATTGGGATCGAAAGGATGGCATTCTCATGATTGAAGCTGATAGACTTTTAAGACCGGGGGGCTACTTTGTCTGGACTTCACCTCTTACAAGTGCTCGTGACAAAGACAACCAGGAAAGATGGAAGTTCATACAAAGTTTTGCTGAAAATCTTTGCTGGGATATGATGTCACAGCAAGATGCAACTGTTGTATGGAAGAAAACAAGTAAAATGAATTGCTATAGTTCAAGAAAGAATAGTTCTCCCCCTCCTTTATGTGGCAGAGGCTATGACGAGGAGTCTCCATATTATCGAGAACTGCAAAACTGCATAGGAGGAACACATAGCAGCCGTTGGATTCCTGTTGAAACGAGGCAAACTTGGCCTTCCAGAGATCACTTGAACAAGAAAGAGCTTGACAACTTTGGGTTGCAATCTGATGAATTTGCTGAGGATTCTGAAAGCTGGAGAGCATCAGTCCGTAATTATTGGTCTCTTCTGTCACCTTTAATATTTTCTGATCATCCAAAGAGACCTGGTGATGAGGACCCTCCGCCACCTTATAACATGCTAAGAAATGTGCTAGACATGAATGCTCATTTTGGTGGTTTTAATTCTGCTCTGTTGCACGCTGGAAAATCTGTATGGGTAATGAATGTGGTACCTTTGGATGGACCCAACTATCTCCCCTTGATCCAGGACCGAGGTTATGTTGGCATTATGCATGATTGGTGTGAGGCCTTTCCAACGTACCCCAGAACCTATGACTTGGTGCATGCAGCAGGACTTTTATCTCTTGAATTTGCTAAGCAGCGCAGCTGTACGATGCTTGACATGTTCATTGAAATTGACAGGTTACTTCGGCCAGAGGGTTGGATTATAATTCGTGACACAGTTCCTTTAGTAGAGTCAGCCAGAGCTCTAACGACAAGGCTAAAGTGGGATGCGCGAGTTGTAGAAATTGAAAGCGACAGCGATCAGAGGCTCCTGATCTGTCAGAAACCTTTCTTTAAGAAACAGGCAAATTAA 2070 0.4256 MSRPLHRGVSIRIPERNNDSLDSQSKDKTEKEGFDRRFSSAHPSPLRSPYRVLLSDNSSSKLGITENGLSSDPYIIGTPRNRHKLVLFFLKFSLVFVVILALAGSFWWTISISTASRGHIYHGYRRLHEQLVSDLLDIGEISYAPSRLKELEFCYQEFENYVPCFNVSDNLALGFTDGNEFDRQCGHELRQDCLSLSPPNYKIPLRWPTGRDIIWVANVKLTAQEVLSSGSLTKRMMMLDEEQISFRSASHMFDGVEDYSHQIAEMIGLRNESNFIQAGVRTILDIDCGYGSFGAHLFQNQLLTMCIASYEPSGSQVQLTLERGLPAMVASFNSKQLPYPSLSFDMLHCARCGIDWDRKDGILMIEADRLLRPGGYFVWTSPLTSARDKDNQERWKFIQSFAENLCWDMMSQQDATVVWKKTSKMNCYSSRKNSSPPPLCGRGYDEESPYYRELQNCIGGTHSSRWIPVETRQTWPSRDHLNKKELDNFGLQSDEFAEDSESWRASVRNYWSLLSPLIFSDHPKRPGDEDPPPPYNMLRNVLDMNAHFGGFNSALLHAGKSVWVMNVVPLDGPNYLPLIQDRGYVGIMHDWCEAFPTYPRTYDLVHAAGLLSLEFAKQRSCTMLDMFIEIDRLLRPEGWIIIRDTVPLVESARALTTRLKWDARVVEIESDSDQRLLICQKPFFKKQAN* 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01596 689 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 160 681 IPR004159 GO:0008168
Lapu9g01596 689 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 196 384 IPR029063 -
Lapu9g01596 689 MobiDBLite consensus disorder prediction 1 43 - -
Lapu9g01596 689 Gene3D Vaccinia Virus protein VP39 238 424 IPR029063 -
Lapu9g01596 689 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 40 684 IPR004159 GO:0008168
Lapu9g01596 689 MobiDBLite consensus disorder prediction 9 38 - -
Lapu9g01596 689 FunFam probable pectin methyltransferase QUA2 242 422 - -
Lapu9g01596 689 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 502 648 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01596 Lapu-Chr9 30585258 30593609 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01596 K23870 - gmx:100812530 1281.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01596 9 30585258 30593609 Lapu9g01596 9 30585258 30593609 ECH