Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01594 ATGGCCTTGTGCAGGTGCCTCTCCTGTTTTACTGGAAAGAAAGACAAAAACAAGGGTACTGCTGAAGGTTCTTCAACAGGGGACCTTAAAGCTCAACTTGGTGAAGTACAGCACCCGAAGATTTCACCAGAGTGTCGTGATTTGAAGCCGGCCACCCTTGATGTTACAGTACCCACTGGTGTGCAGAAGAATTCAAGGGGAAATGTGAGGATTATGAATCTTGAGAGTCCTGTGAAGAATGAAGTGGAGGAAGCTTATGAAGGGGAAGACGAGCATGAGGAGTCTCCTTCGATCAAGAGGGAGCTCTCTGACTTTGATCTTCAAGTAAACGAAGCTGCTGCAAGCAAAGGAAGATATGATCCATCAAATGAAGAAATAAAATACCCCAGTTTATATGAAGACCAAGCTAACATTCAATTCGAAGACAGAGATCATAAGTATAGCAAAAAGAGTGATGATATAATCCAGAGTGGACATGTCAGTGATCCTGGGATTGGCAAGGCTGACTTTTGGGCTTCTCCAAAGCTTAAGAGATCTTGTTCTGACCTGGAAAGAAGGGATGTACTAAGGAATACTTCTCATCTCTTTCCAACTTCTAAGTCACAGTCTTTTGAGGATTTGCACGGATTATCAGCATATCAGATGGTTAATTTAGAAAGCCCCAGGTCTGTGATGACTCACTGCAGTGCTGATAGAGTGATGTTGAAAAGGCATTCCTCAAGTCAAGTTCTCCCTTCTAGAAGTAAAAGATTGTGGTGGAAGTTGTTCCTCTGGAGCCACAGAAATATACATAGATCTCAGTTAAGCAAATCGACACAAATACATCCTGCAATTGCTGCTTTAAGTAGTCAATGTGGGTACTCCTCCGACACCCTTGAACCTAAACAAGGCAAGACATTGAGACACGAAGAATCACCCTCACCAACCTCATCTTTTGGGGACTACTTTCAGAAAAGCTGCGATGACCAAAATGTTGATAACCAAAGGTGGAGCAGATTTCAGAGGGAGAATTTTGGTTTTTGGCCACAAAATCAGTGGGTGGCTTTCTCAACAGAATCGTCCTCGCTTAGCAGAGTGGATGAGTGGGTGAAAGATCTCCAAATTCAGCAGCCACCTCCTCAGGATGATTTGGGTGATGACAACATTGGAAGCTTTGCCTTCCCACCTTCTCCTGATGATGGTAGATCAACGGCAAGAAGCACCTCTCAGTTGATTCGACATCCAGATGCCAATCTTTCAAAAGAGATATTGAATGCCAATAGTGTGGTCCAGTCCCTAAACCCAGCCTCAATTGCAGCTCATGTATCAGGCATTGGTATAAAAGCCATCCCCTCTCTTTCACACTTCTTCAGTCTCCGCTCTGTCAATTTGTCAAACAATCTTATAGTTCACATCACCCCTGGATTTCTCCCAAAGGGTATTCATACACTGAATCTGTCAAGAAACAAAATCAGCACTATTGAGGGCCTCAGAGAATTAACCCGGCTGCGGGTACTTGATTTAAGTTACAATCGCATCTCAAGAATTGGACAAGGATTATCAAGTTGTACCCTAGTCAAAGAGCTATATCTTGCCGGAAACAAGATAAGTGATGTTGAGGGGCTGCATAGGTTATTGAAGCTAAAAGTTCTGGACTTGAGCTTTAACAGGATCGCAACAACAAAAGCATTAGGCCAGCTGGTGGCTAACTACAACTCACTTCAGGCCTTGAATCTGCTAGGAAATCCAATTCAAAGCAACATCAGTGATGATCAGTTGCGCAAAGCCGTTAGTGGTCTTCTTCCGAAGCTTGTGTACCTGAACAAGCAATCTATCAAGCCTCAAAGAGGACGAGAAATCCTCACTGATAGTGTTGCCAAAGCTGCACTTGGGAAAAGCGGCCACAACTCCTACAGAAGAGTACTAAAGAAAGGTGGCGGCCAAGGAGGGTCAAGTTCCTCCAGTGTGCATAGAGGGAGTGCTAGTGTTTCCCACAAAAGCAGGAATAGGTCAAGGAGCCGAACTAAGCATCATTAG 2016 0.441 MALCRCLSCFTGKKDKNKGTAEGSSTGDLKAQLGEVQHPKISPECRDLKPATLDVTVPTGVQKNSRGNVRIMNLESPVKNEVEEAYEGEDEHEESPSIKRELSDFDLQVNEAAASKGRYDPSNEEIKYPSLYEDQANIQFEDRDHKYSKKSDDIIQSGHVSDPGIGKADFWASPKLKRSCSDLERRDVLRNTSHLFPTSKSQSFEDLHGLSAYQMVNLESPRSVMTHCSADRVMLKRHSSSQVLPSRSKRLWWKLFLWSHRNIHRSQLSKSTQIHPAIAALSSQCGYSSDTLEPKQGKTLRHEESPSPTSSFGDYFQKSCDDQNVDNQRWSRFQRENFGFWPQNQWVAFSTESSSLSRVDEWVKDLQIQQPPPQDDLGDDNIGSFAFPPSPDDGRSTARSTSQLIRHPDANLSKEILNANSVVQSLNPASIAAHVSGIGIKAIPSLSHFFSLRSVNLSNNLIVHITPGFLPKGIHTLNLSRNKISTIEGLRELTRLRVLDLSYNRISRIGQGLSSCTLVKELYLAGNKISDVEGLHRLLKLKVLDLSFNRIATTKALGQLVANYNSLQALNLLGNPIQSNISDDQLRKAVSGLLPKLVYLNKQSIKPQRGREILTDSVAKAALGKSGHNSYRRVLKKGGGQGGSSSSSVHRGSASVSHKSRNRSRSRTKHH* 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01594 671 ProSiteProfiles Leucine-rich repeat profile. 540 561 IPR001611 GO:0005515
Lapu9g01594 671 MobiDBLite consensus disorder prediction 288 313 - -
Lapu9g01594 671 FunFam Outer arm dynein light chain 1 protein 398 511 - -
Lapu9g01594 671 Gene3D Ribonuclease Inhibitor 513 610 IPR032675 -
Lapu9g01594 671 FunFam Outer arm dynein light chain 1 protein 512 610 - -
Lapu9g01594 671 Gene3D Ribonuclease Inhibitor 412 512 IPR032675 -
Lapu9g01594 671 MobiDBLite consensus disorder prediction 629 671 - -
Lapu9g01594 671 SMART LRR_sd22_2 538 559 - -
Lapu9g01594 671 SMART LRR_sd22_2 516 537 - -
Lapu9g01594 671 SMART LRR_sd22_2 471 492 - -
Lapu9g01594 671 SMART LRR_sd22_2 493 515 - -
Lapu9g01594 671 MobiDBLite consensus disorder prediction 640 655 - -
Lapu9g01594 671 ProSiteProfiles Leucine-rich repeat profile. 518 539 IPR001611 GO:0005515
Lapu9g01594 671 MobiDBLite consensus disorder prediction 656 671 - -
Lapu9g01594 671 Pfam Leucine rich repeat 451 506 IPR001611 GO:0005515
Lapu9g01594 671 PANTHER NISCHARIN RELATED 208 657 - -
Lapu9g01594 671 MobiDBLite consensus disorder prediction 369 402 - -
Lapu9g01594 671 ProSiteProfiles Leucine-rich repeat profile. 495 517 IPR001611 GO:0005515
Lapu9g01594 671 ProSiteProfiles Leucine-rich repeat profile. 473 494 IPR001611 GO:0005515
Lapu9g01594 671 SUPERFAMILY Outer arm dynein light chain 1 441 605 - -
Lapu9g01594 671 SMART LRR_typ_2 538 560 IPR003591 -
Lapu9g01594 671 SMART LRR_typ_2 493 516 IPR003591 -
Lapu9g01594 671 SMART LRR_typ_2 449 471 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01594 Lapu-Chr9 30576982 30580969 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01594 473 582 Receptor kinase-like Gene Family AT4G39400 34.188 7.24e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01594 - - gmx:100810094 1100.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01594 9 30576982 30580969 Lapu9g01594 9 30576982 30580969 ECH