Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01566 ATGGCTGCTGAAGTATATTACCAGGCTATTGGCACTTTGCAGTCTCATTCTTATCTGAATAACTTTAATCATCACCAGAAGCATCAAAACAACGTAGTAAGATTGGTGGCTAGGGATTTTATCAGTGGTAATGGCTTGTCAAGGAGAAGTAGTGGCCAGAGGAATTGCACTGCAATTCGATCTCTAGCTTCGCAAACATCAGTGGTTGATCCGGTGTTGTCCCCTTCAAGAAGCAATTCTGGTGACAGTTACAAGAAATCAAATGAAGCAGCTTTAATCCTTATTCGGCATGGTGAGTCATTATGGAATGAAAAGAACTTATTCACTGGGTGTGTTGATGTCCCTCTAAGCAAAAAGGGTATAGATGAAGCAATTGAAGCTGGAAAAAGAATTAGAAGCATTCCTGTTGATGTCATATTTACATCGGCTTTGATTCGTGCACAAATGACAGCCATGCTTGCTATGACCCAGCACCGTCGTGGGAAGGTCCCTATCATTATTCACAATGAGAGTGAACGAGCAAGGTCATGGAGTCAAGTTTTTAGTGAAGATACAAAAAAACAGTCCATTCCAGTCATAGCAGCTTGGCAACTAAATGAAAGAATGTATGGGGAACTGCAGGGTCTCAATAAGCAAGAAACAGCTGACAGATATGGGAAAGAGCAAGTCCATGAGTGGCGCCGAAGTTATGACATACCTCCTCCAAATGGTGAAAGCTTGGAAATGTGTGCTCAAAGAGCAGTTGCCTATTTCAGAGACCAAATTGAACCGCAACTTTTATCTGGAAAGAATGTTATGATTTCAGCCCATGGGAATTCATTGAGATCCATTATCATGTACCTTGATAAATTAACTTCCCAAGAGGTCATTAGTTTGGAACTGTCAACTGGAATTCCCATGCTTTACATTTTCAAAGAGGGAAGATTCATTAGGAGGGGGAGTCCCGTAGGGCCTTCTGAAGCTGGAGTTTATGCCTATACAAGGGCACTGACAACTTTACTTGTTCACAGCGTTTGGCTCTTTACAAGCAGAAGTTGGATGACATGTTCGAATGATATATTGTTTAGGAAATACATTCACAGTTAA 1086 0.4125 MAAEVYYQAIGTLQSHSYLNNFNHHQKHQNNVVRLVARDFISGNGLSRRSSGQRNCTAIRSLASQTSVVDPVLSPSRSNSGDSYKKSNEAALILIRHGESLWNEKNLFTGCVDVPLSKKGIDEAIEAGKRIRSIPVDVIFTSALIRAQMTAMLAMTQHRRGKVPIIIHNESERARSWSQVFSEDTKKQSIPVIAAWQLNERMYGELQGLNKQETADRYGKEQVHEWRRSYDIPPPNGESLEMCAQRAVAYFRDQIEPQLLSGKNVMISAHGNSLRSIIMYLDKLTSQEVISLELSTGIPMLYIFKEGRFIRRGSPVGPSEAGVYAYTRALTTLLVHSVWLFTSRSWMTCSNDILFRKYIHS* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01566 361 PANTHER PHOSPHOGLYCERATE MUTASE 81 328 IPR005952 GO:0006096|GO:0016868
Lapu9g01566 361 SUPERFAMILY Phosphoglycerate mutase-like 92 308 IPR029033 -
Lapu9g01566 361 CDD HP_PGM_like 92 311 IPR013078 -
Lapu9g01566 361 Hamap 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 89 316 IPR005952 GO:0006096|GO:0016868
Lapu9g01566 361 Pfam Histidine phosphatase superfamily (branch 1) 170 295 IPR013078 -
Lapu9g01566 361 Pfam Histidine phosphatase superfamily (branch 1) 92 168 IPR013078 -
Lapu9g01566 361 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 94 103 IPR001345 GO:0003824
Lapu9g01566 361 Gene3D - 82 315 IPR029033 -
Lapu9g01566 361 SMART PGAM_5 91 277 IPR013078 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01566 Lapu-Chr9 30217455 30221054 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01566 K01834 - gmx:100802621 606.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01566 9 30217455 30221054 Lapu9g01566 9 30217455 30221054 ECH