Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01564 ATGTTGTTAGGGAAGAGACCTCGTCCTCCAATGAAGAGAACCACAAGCATGTCAGAGATAACCTTCGATCTGAACACAACCTTGGACGATGATCAAAACAACCCCGTCAAGGGAGGAGTTGTGCCGGACCCATGGTCCAAACACCCACCGGTTGCTGGGTCCAACTGTTTAGATCAGAGTAGGGTTTGGGCCCTAGTTTCACCCAGAAACCATAGAAGGCATTCGGAAGATTCGTCACACACCCCTGAGTTCTTGCGCGTTTGCTTTCTCTGCAAACGCCGTTTAGTTCCTGGTCGTGACATCTACATGTACAGAGGTGACAGTGCTTTCTGCAGTTCAGAATGCCGAGAAAAACAGATGAAGCAGGACGAGCGAAAGGATAATAAGTGTGGTGTGGCATCAAAGAAACAAGTTGCGGCTACGCCTTCTGGGTCTCAAGTTAGGAGTACCAAAGGTGAAACCGTTGTTGCCTTGTAG 477 0.4906 MLLGKRPRPPMKRTTSMSEITFDLNTTLDDDQNNPVKGGVVPDPWSKHPPVAGSNCLDQSRVWALVSPRNHRRHSEDSSHTPEFLRVCFLCKRRLVPGRDIYMYRGDSAFCSSECREKQMKQDERKDNKCGVASKKQVAATPSGSQVRSTKGETVVAL* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01564 158 ProSiteProfiles Zinc finger FLZ-type profile. 83 127 IPR007650 -
Lapu9g01564 158 MobiDBLite consensus disorder prediction 138 152 - -
Lapu9g01564 158 PANTHER FCS-LIKE ZINC FINGER 5 1 152 - -
Lapu9g01564 158 MobiDBLite consensus disorder prediction 122 158 - -
Lapu9g01564 158 Pfam zinc-finger of the FCS-type, C2-C2 76 126 IPR007650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01564 Lapu-Chr9 30196543 30197100 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01564 - - var:108331042 290.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01564 9 30196543 30197100 Lapu9g01564 9 30196543 30197100 ECH