Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01555 ATGGGTGCATTTTTCAGTGTGGCCAGTACAAAATCTGAAAAAAGGGAATGGAATGGAGTCTCTCCAAATGAGACATGTAAGAGGCAACGAATGTCTCCTACTGTTGATGAAGAGAGTCCAAGGCTCATTCCTAATCTCCCTGATGAGTTATCACTTCAGATCATTGCTAGACTTCCTAGAATTTGTTACTTAAATGTAAGGATGGTATCCAAGAAGTGGAAGTCAACTATCACGAGTTCAGAACTGTATAAATTAAGGAAAGAACTTGGGACAACTGAAGAGTGGCTGTATCTGTTGATTAAGGTTGGAGAAAATAATCTTCTATGGCATGCTCTAGATCCTCGTTCTAAGATATGGCAGAGAGTGCCTAATATGCCCAATTTTGCCAATGAAGAAGAACCTAGAAAAGGTTCCTCTAGGCTTTGGATGTGGAACATGGTGGAGGGTATCAGAATTGCTGAAGTTATTAGAGGCTTTCTAGGACGGAAGGATGCATTTGATGAAATGCCCTATTGCGGTTGTGCAATTGGAGCTGTTGATGGGTGTCTCTATGTTCTTGGTGGATTTTCTAAAGCTTCAACTATGAGATGTGTGTGGCGATTTGATCCTATACAAAGTATATGGAGCAAAGTGACTCCTATGTCCACTGGTCGGGCGTACGGTAAGACAGGCATCTTAAATAACAAGCTTTATGTTGTTGGAGGGGTTAGTCAAGGTCAAGCTGGATTGGTTCCTCTCCAATCTGCTGAAGTTTTTGACCCCTCTACAGATACATGGTCGAATGTACCTAGTATGCCATTCTCTAGAGCTCAAGTCCTTCCCAGTGCTTTTTTGGCTGACATGTTAAAGCCTATTGCCACTGGGTTGACCTCATACATGGGAAGGTTGTATGTTCCACAGAGTCTGTATTCATGGCCCTTTTTTGTTGATGTTGGGGGAGAAATCTATGATCCTGACACTAACTCATGGATAGAAATGCCAGCTGGAATGGGTGAAGGCTGGCCTGCACGGCAGGCAGGAACCAAATTGAGTGTTGTAGTAGACGGTGAATTATATGCTTTTGACCCTTCTAATTCAATGGATAGTGGAAGGATCAAGGTATATGACCAAGGAGAAGATGCTTGGAAAGTAGTCATTGGAAAAGTCCCCATATATGATTCTGCTGATTCAGAGTCTCCATATCTACTTGCTGGTTTTCATGGAAAGCTCCATGTTATTACAAAGGATGCCAATCATGACATTGCTGTTCTGCAGGCAGGTCTGCGGAATAATTTGGGTTCCTCACCATCACTATCAACTCTGTCACAAAGTACATCGCATGAATCTCCAGAACTGGCTTCTGAATCAGATGCAGCAGTTGTTTGGAGGGTAGTTGCCAGCAGGGATTTTGGGCAGGCTGAACTAGTCAGTTGCCAAGTTATTGACATATAG 1431 0.4291 MGAFFSVASTKSEKREWNGVSPNETCKRQRMSPTVDEESPRLIPNLPDELSLQIIARLPRICYLNVRMVSKKWKSTITSSELYKLRKELGTTEEWLYLLIKVGENNLLWHALDPRSKIWQRVPNMPNFANEEEPRKGSSRLWMWNMVEGIRIAEVIRGFLGRKDAFDEMPYCGCAIGAVDGCLYVLGGFSKASTMRCVWRFDPIQSIWSKVTPMSTGRAYGKTGILNNKLYVVGGVSQGQAGLVPLQSAEVFDPSTDTWSNVPSMPFSRAQVLPSAFLADMLKPIATGLTSYMGRLYVPQSLYSWPFFVDVGGEIYDPDTNSWIEMPAGMGEGWPARQAGTKLSVVVDGELYAFDPSNSMDSGRIKVYDQGEDAWKVVIGKVPIYDSADSESPYLLAGFHGKLHVITKDANHDIAVLQAGLRNNLGSSPSLSTLSQSTSHESPELASESDAAVVWRVVASRDFGQAELVSCQVIDI* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01555 476 ProSiteProfiles F-box domain profile. 40 86 IPR001810 GO:0005515
Lapu9g01555 476 PANTHER OS02G0202900 PROTEIN 27 475 IPR045887 -
Lapu9g01555 476 SMART kelc_smart 229 279 IPR006652 GO:0005515
Lapu9g01555 476 SMART kelc_smart 182 228 IPR006652 GO:0005515
Lapu9g01555 476 Pfam F-box domain 44 84 IPR001810 GO:0005515
Lapu9g01555 476 SUPERFAMILY Kelch motif 95 406 IPR015915 GO:0005515
Lapu9g01555 476 SUPERFAMILY F-box domain 39 93 IPR036047 GO:0005515
Lapu9g01555 476 Pfam Kelch motif 170 215 IPR006652 GO:0005515
Lapu9g01555 476 Pfam Kelch motif 218 266 IPR006652 GO:0005515
Lapu9g01555 476 Gene3D - 103 385 IPR015915 GO:0005515
Lapu9g01555 476 MobiDBLite consensus disorder prediction 15 39 - -
Lapu9g01555 476 CDD F-box_AtAFR-like 42 86 - -
Lapu9g01555 476 Gene3D - 41 96 - -
Lapu9g01555 476 SMART fbox_2 46 86 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01555 Lapu-Chr9 30000977 30003587 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01555 36 264 Miscellaneous Gene Families AT4G33900 27.119 2.59e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01555 - - gmx:100806691 891.338
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01555 9 30000977 30003587 Lapu9g01555 9 30000977 30003587 ECH