Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01551 ATGGAAAATCTACAGTCAGAGGAGACAAATGGAGTGAATTCTCAAGCTGTTGAGAACTTGCGGGTAGATGATTTGGTAATTCATCAGGAGAAACATTCAAAGGAGGCGGAAGCTCAGAATATTGGTCATGATGGTTCCGAGTTTGATGATATATCAGATGCGGAAGATGTAAGGTCTAAGCGGACCAATGAGAACAGGGATCTGCAATCAGGAACTCAACTGGAAAACTTGGACACCAAATCTGAAACTGAAGTTATTACTGATAGGCAAGAGGATTCTGGTGATAAGACGAGTGCTGATGGAGATTTGGAGTCTAGAAACCGAGAAACAAATCTAGATGGTAATTCTGGACAGGGTGACTTGGCTAAAGAAGTGGATGATAGGGAATCAACGCAGCTGTTTGATAAGTCAGATGAAATTCCGAACGAGGACCCCAATTTGGAGCCTGTATTTGATGGAACAGAGGTTCCAGGGATGGAAGCTAACCGTAGTATGTCTGGCCGTAGGTTGGATGCAGATCAGGAGTCACCAGGTGTGGTTGAGAAGGCTGTGGCTCTTAAGAATTTTGTTAAGGAGAAGAGTGCAGTGGCAGTCTCCACCATGATGCGTCGTCTTTCTGGAAAAAGAGATGAAGGTGCTGTGGATAATGTTGATGATGAAGGTAAGGATGTATCAGATATTGGAAAACTTGGTGAACACAAAGTAGTGTCTGAGAAGACAGTGGAGAAATTTGACTGGAATCCCTTAAATTATATCAAGAAGTCATCCGATGCTGGAGTGGAAAACAAAACTGAGCAGATAGACTCAATAGTCATGAAAGGAAGGATTATACTGTACACAAAACTAGGGTGCCTAGAATCTAACGAGATTAGGATGTTTTTGCGTTTGAAAAGGCTCAGATATGTCGAAATCAATATCGATGTGTTCCCCAGTAGAATGAAGGAGCTGGAGAAGATTTCTGGATCTACTTCTGTACCTAAGGTTTTTTTCAATGAAATACTTATCGGAGGCTCGAGCGAGTTGAAGATTCTAGATGAATCTGGCAAACTTGACGAGAAGGTTGACTTTCTTATTACTGAAGCACCATTATTTGAGGCCCCATCGCCACCTCTTTCTGGAGAGGATGATGTGCCCAGTAGTGGACTACCTGATGAAATGGCAGTTGTTGTCCGCAAAATGAAAGAATCTATTGCTGTGAAGGACCGCTTGCATAAAATGCGCCGGTTCACTAACTGTTTTCTTGGCTCGGATGCAATCGACTTCTTATCAGAAGATCAATATTTGGAAAGGCCAGAGGCTGTTGAGTTTGCACGAAAGCTTGCTGACAAAAACTTCTTTCGACATGTTACTGATGAAAATGTATTTGAGGATGGCAATCACCTGTATCGGTTTTTGGATGATGACCCCATTGTGGTGTCACAATGTCAAAACATTCCTAGAGGCATAATTACCTTGAAGCCCAAGCCTTTAGGGGAAATAGCGTCAAGACTAAGGTTTCTGTCCCGTGCAATATTTGAAGCCTATGCTTATGAAGATGGTCGTCGTGTTGATTATACAAGTATACGTGGAAGTGAAGAGTTCGCAAGGTATCTGAGAATTGTGGAAGAGCTTCAGAGAGTGGAAATATCGGATTCTTCTAGAGAAGAGAAGCTTGCGTTCTTTATTAATCTTTATAATATGATGGCCATCCATGCCATCTTAGTGTTGGGCCATCCAGATGGAGCACTGGAAAGAAGGAAATTATTTGGAGAGTTCAAGTATGTTATTGGTGGGTCCACCTACTCACTTTCAGCCATTCAAAATGGCATATTGCGGGGAAATCAGCGACCACCATATAACCTTAAGAAGCCATTTGGTGCAAAAGATAAACGTTCGACGGTGGCACTTCCTTACCCTGAGCCTCTTGTTCATTTTGCTTTGGTATATGGCACTCGATCTGGTCCTGCACTTCGGTGCTACTCTCCTGGAAAGATTGATGAAGAGTTATTGGATGCAGCCCGAAATTTCTTAAGAAATGGAGGCGTTGTAATTGATTTGAGTGCAAAGGCTGTAAACGCTAGTAAGATCCTTAAATGGTATAGTATAGATTTTGGCAAGAACGAGGTAGAGGTGATAAAGCATGTTTCAAACTACTTAGATCCAGCTGAGTCAGAAGTGTTGTTGGACCTACTTGCTACTTCCGAATTGAAGGTGACATATCAGCCTTATGACTGGGGTTTGAACTGCTAG 2229 0.424 MENLQSEETNGVNSQAVENLRVDDLVIHQEKHSKEAEAQNIGHDGSEFDDISDAEDVRSKRTNENRDLQSGTQLENLDTKSETEVITDRQEDSGDKTSADGDLESRNRETNLDGNSGQGDLAKEVDDRESTQLFDKSDEIPNEDPNLEPVFDGTEVPGMEANRSMSGRRLDADQESPGVVEKAVALKNFVKEKSAVAVSTMMRRLSGKRDEGAVDNVDDEGKDVSDIGKLGEHKVVSEKTVEKFDWNPLNYIKKSSDAGVENKTEQIDSIVMKGRIILYTKLGCLESNEIRMFLRLKRLRYVEINIDVFPSRMKELEKISGSTSVPKVFFNEILIGGSSELKILDESGKLDEKVDFLITEAPLFEAPSPPLSGEDDVPSSGLPDEMAVVVRKMKESIAVKDRLHKMRRFTNCFLGSDAIDFLSEDQYLERPEAVEFARKLADKNFFRHVTDENVFEDGNHLYRFLDDDPIVVSQCQNIPRGIITLKPKPLGEIASRLRFLSRAIFEAYAYEDGRRVDYTSIRGSEEFARYLRIVEELQRVEISDSSREEKLAFFINLYNMMAIHAILVLGHPDGALERRKLFGEFKYVIGGSTYSLSAIQNGILRGNQRPPYNLKKPFGAKDKRSTVALPYPEPLVHFALVYGTRSGPALRCYSPGKIDEELLDAARNFLRNGGVVIDLSAKAVNASKILKWYSIDFGKNEVEVIKHVSNYLDPAESEVLLDLLATSELKVTYQPYDWGLNC* 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01551 742 MobiDBLite consensus disorder prediction 23 65 - -
Lapu9g01551 742 Gene3D Glutaredoxin 261 356 - -
Lapu9g01551 742 MobiDBLite consensus disorder prediction 1 17 - -
Lapu9g01551 742 Pfam Protein of unknown function, DUF547 544 670 IPR006869 -
Lapu9g01551 742 CDD DEP 385 463 - -
Lapu9g01551 742 SUPERFAMILY "Winged helix" DNA-binding domain 389 470 IPR036390 -
Lapu9g01551 742 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 10 742 - -
Lapu9g01551 742 ProSiteProfiles Glutaredoxin domain profile. 264 361 - -
Lapu9g01551 742 SMART DEP_3 393 466 IPR000591 GO:0035556
Lapu9g01551 742 MobiDBLite consensus disorder prediction 120 143 - -
Lapu9g01551 742 MobiDBLite consensus disorder prediction 66 80 - -
Lapu9g01551 742 MobiDBLite consensus disorder prediction 1 174 - -
Lapu9g01551 742 MobiDBLite consensus disorder prediction 81 109 - -
Lapu9g01551 742 ProSiteProfiles DEP domain profile. 393 466 IPR000591 GO:0035556
Lapu9g01551 742 Gene3D - 385 503 IPR036388 -
Lapu9g01551 742 Pfam Glutaredoxin 276 332 IPR002109 -
Lapu9g01551 742 Pfam Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) 397 464 IPR000591 GO:0035556
Lapu9g01551 742 SUPERFAMILY Thioredoxin-like 263 354 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01551 Lapu-Chr9 29965058 29969426 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01551 - - gmx:100820242 1237.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01551 9 29965058 29969426 Lapu9g01551 9 29965058 29969426 ECH