Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01490 ATGGCTCAAACCATGCTGCTCATGTCTAGTGTCTCTAGCAGCTACTCCGTGGATTTGAAGAAAGAACTTTTTCTCCATTTAAGGCCTAAGTTCTCTCAACTCTCATTCAACCCTCTTCCATCATCAACTTCTTTCATTTCTTCACCTCCTACATTCACAACTCTCGCCCTCTTCAAATCAAAGACCAAGGCCCCTCCTGCTAAGACCAAGGTTGAAAAGCCAAAGCAAAAGGTTGAAGATGGTATCTTTGGCACTTCTGGAGGGTTTGGTTTTACTAAGCAGAACGAGCTCTTCGTGGGTCGTGTTGCCATGCTTGGTTTTGCTGCATCACTGTTGGGAGAAGGAGTAACTGGGAAAGGAATTCTAGCACAATTGAATCTGGAAACTGGAATTCCCATTTATGAAGCAGAGCCCCTTCTTCTGTTTTTCATCCTTTTCACGCTGCTAGGAGCCATTGGAGGTTTAGGTGACCGTGGCAAATTCGTTGATGACGAACCTACCACTGGAGGCGTTATTCCTTCAGGCAAAGGCTTCAGAGAAGCTCTTGGTCTGGGTTCAGGTCCATTGTTTGGATTCACGAAAGCTAACGAGCTATTTGTGGGAAGATTGGCTCAACTGGGGTTCGTTTTCTCTTTGATTGGAGAGATTGTCACTGGGAAGGGAGCACTAGCCCAGCTGAACATTGAGACTGGAGTACCAATCAACGAAATCGAACCCCTTGTGTTGTTCAACGTTCTTTTCTTCTTCATTGCTGCTTTGAATCCTGGAACTGGCAAATTCGTTAGAGATGAGGGGGAAGATGATTAG 807 0.4548 MAQTMLLMSSVSSSYSVDLKKELFLHLRPKFSQLSFNPLPSSTSFISSPPTFTTLALFKSKTKAPPAKTKVEKPKQKVEDGIFGTSGGFGFTKQNELFVGRVAMLGFAASLLGEGVTGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGGLGDRGKFVDDEPTTGGVIPSGKGFREALGLGSGPLFGFTKANELFVGRLAQLGFVFSLIGEIVTGKGALAQLNIETGVPINEIEPLVLFNVLFFFIAALNPGTGKFVRDEGEDD* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01490 268 FunFam Photosystem II 22 kDa protein, chloroplastic 39 135 - -
Lapu9g01490 268 Gene3D Chlorophyll a/b binding protein domain 50 133 - -
Lapu9g01490 268 FunFam Photosystem II 22 kDa protein, chloroplastic 136 237 - -
Lapu9g01490 268 Pfam Chlorophyll A-B binding protein 87 209 IPR022796 -
Lapu9g01490 268 Gene3D Chlorophyll a/b binding protein domain 134 238 - -
Lapu9g01490 268 SUPERFAMILY Chlorophyll a-b binding protein 77 246 - -
Lapu9g01490 268 PANTHER UPF0041 BRAIN PROTEIN 44-RELATED 69 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01490 Lapu-Chr9 29268189 29270802 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01490 K03542 - gmx:100807355 439.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01490 9 29268189 29270802 Lapu9g01490 9 29268189 29270802 ECH