Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01471 ATGAAATTCCGTTACCCCATCCTCCTTCTATCAATCCTTCTCGCACTCTCGGCGACGCTCTCAGTCGCGGAGCCCACTCCCTCCGCCGCTTACGACCGCGTGCTGTTTCCGGACCGCCGATGCCAGAGAGCGGTCTCGGAGAACAGCACGCGGCGCGCCGCTTCTGCGGCGGCGGCGGAGTGCGAGGTGTGGAGCGAGGCGTGTTCGGAGGCGGTGCTGAGTCTTGCGCTGCGGTCGGAGACGGTGGAGTGGCTGACAGAGATTCGGCGGAAGATCCACGCGAATCCTGAGTTGGCGTTTGAGGAAATCGAGACGAGTCGTTTGGTGAGAGAGGAGTTGGATCTGATGGAAGTTAGTTATCGGTACCCTCTCGCGAAGACCGGTATTCGAGCCTGGATCGGCACTGGTGGTCCTCCTTTTGTTGCCATCAGAGCTGACATGGACGCACTTCCCATCCAGGAAGCTGTGGAGTGGGAGCACAGGTCTAAAGTTGCCGGCAAAATGCATGCTTGTGGGCACGACGCACACGTCGCTATGCTTATTGGCGCTGCCAAGATCTTGAAAACTCGAGAACATTTATTAAAGGGAACTGTAATTTTGATATTCCAGCCAGCAGAAGAAGCCGGTAATGGAGCAAAACGAATGATGCAAGATGGTGCTTTGGAGGACGTGGAGGCAATATTTGCAGTTCATGTATCACATGAACATCCAACTGGTATAATTGGGTCAAGGCCTGGGCCCGTCCTTGCTGGTTGTGGGTTTTTCAGAGCTGTCATTAGTGGCAAAAAGGGTTTTGCTGCCGATCCTCACCGTTCTGTTGACCCTGTTTTAGCTGCTTCAGCTTCTGTTATCAGCTTACAGGGTATTGTCTCCCGCGAATCAAATCCACTGGATTCTCAGGTTGTCTCTGTAACTTCGTTTAATGGAGGCAACAATCTTGACATGATACCAGACACAGTGGTCCTCGGTGGGACTTTCAGAGCCTTCTCTAACACCAGCTTTTACCAGCTACTTGAAAGAATAGAACAGGTGATTGTTGACCAGGCCAGTGTGTATAGATGTTCGGCAGAAGTTGACTTCTTTGAAAAGGAGTACACTATTTACCCTCCCACAGTGAATGATGAGAGAATGTATGAGCATGTGAAGAAGGTATCCATTGATTTGCTGGGTCAGAAGAATTTCAGGGTAGTCCCACCTATGATGGGTGCTGAAGATTTTTCCTTCTACTCCGAGGTGGTTCCCTCAGCTTTCTTCTACATAGGGATAAGGAATGAAACACTGGGGTCTACTCATACAGGACACTCTCCATATTTCATGATTGATGAAGACGTTCTACCAATAGGTGCTGCTACGCATGCTACTATTGCAGAGAGGTACCTCATTGAACATGGCTAA 1395 0.5054 MKFRYPILLLSILLALSATLSVAEPTPSAAYDRVLFPDRRCQRAVSENSTRRAASAAAAECEVWSEACSEAVLSLALRSETVEWLTEIRRKIHANPELAFEEIETSRLVREELDLMEVSYRYPLAKTGIRAWIGTGGPPFVAIRADMDALPIQEAVEWEHRSKVAGKMHACGHDAHVAMLIGAAKILKTREHLLKGTVILIFQPAEEAGNGAKRMMQDGALEDVEAIFAVHVSHEHPTGIIGSRPGPVLAGCGFFRAVISGKKGFAADPHRSVDPVLAASASVISLQGIVSRESNPLDSQVVSVTSFNGGNNLDMIPDTVVLGGTFRAFSNTSFYQLLERIEQVIVDQASVYRCSAEVDFFEKEYTIYPPTVNDERMYEHVKKVSIDLLGQKNFRVVPPMMGAEDFSFYSEVVPSAFFYIGIRNETLGSTHTGHSPYFMIDEDVLPIGAATHATIAERYLIEHG* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01471 464 PANTHER PEPTIDASE M20 FAMILY MEMBER 65 463 IPR017439 GO:0016787
Lapu9g01471 464 Pfam Peptidase family M20/M25/M40 142 457 IPR002933 GO:0016787
Lapu9g01471 464 Gene3D - 250 368 - -
Lapu9g01471 464 FunFam N-acetyldiaminopimelate deacetylase 250 368 - -
Lapu9g01471 464 PIRSF Amidohydrol_AmhX 73 463 IPR017439 GO:0016787
Lapu9g01471 464 CDD M20_IAA_Hyd 85 460 IPR044757 GO:0009850|GO:0016787
Lapu9g01471 464 SUPERFAMILY Zn-dependent exopeptidases 79 462 - -
Lapu9g01471 464 SUPERFAMILY Bacterial exopeptidase dimerisation domain 251 360 IPR036264 -
Lapu9g01471 464 NCBIfam amidohydrolase 85 448 IPR017439 GO:0016787
Lapu9g01471 464 Gene3D Zn peptidases 86 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01471 Lapu-Chr9 29093310 29103037 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01471 K21604 - gmx:100785666 818.92