Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01466 ATGCCAGCTTCTCCTTCAGAGAACCGAACCAGATGGAGGAAGCGCAAGAGAGATTCGCAGATCACCCGGCGCCACCCCAAGCACGAGGAGGAGGAGGACGACGAAGAAGAAAACCCCAATGCGGAGGATGACCATGCGGAACGCGAGTACGATTCCGAGGAACAAACGCACCACCACCCGAACCACCCTAATTCGCAACCGCACCTGGAGACGGAGGTCCTCTCCGACCATGGCATTCCCATTTCGCAGTTCCCGGCTGTGATAAAGCGCTCTGTGAACCGTCCTCACTCTTCCGTCACCGCAATTGTGGCTCTGGAGCGAGCCCTCGAGTCTGGAGACAACAAGGCTCAGAGCGCTCTCACTCCTCCTGTTCTCGAAAACGTGTCTCACGGCCAGCTTCAAGCGCTGTCGTCTGTGCCGTCTGATAACTTCGCTTTTGACGGTGATTCCTCTTTTGTCATCACTCCCCCTGCCATATTGGAAGGTCGTGGAGTTGTTAAGCGCTTTGGAGCTAAGGTTCTTGTAGTTCCAATGCATTCAGATTGGTTTTCGCCTGCCACCGTGCATAGGTTAGAGAGGCAAGCAGTGCCGCATTTCTTTTCTGGGAAATCAGCAGATCATACTCCAGAGAAGTACATGGAGTGTAGGAACTGCATTGTTGCTTTGCACTTGGAGGACCCTGGGAAGAGGATTACGGTTTCTGATTGCCAGGGTTTGTTGACTGGGGTTGATGTTGAAGATTTGACTCGGATTGTGAGGTTCCTTGATCATTGGGGGATTATTAATTACTGTGTTCAAATGCCGAGTCTTGAGTCTCCCAATTTTATGTCTTGCCTGAGGGAGGAACCTGGTGGCGAGGTCCGTGTGCCGGCAGAGGCTTTGAAATCTATAGATAGTTTGATCAAATTTGACAATCCCATTTGTAAGCTGAAAGCAGACGAAATTTATTCGTCATTGACAGCACACAATGCAAATGTCTTTGATCTGGAGGACAGAATAAGAGAGCATCTATCGGATAATCATTGCAATTATTGTTCTCGTCCTCTTCCTGTTGTATACTACCAGTCTCAAAAAGAGGTTGACATTTTACTCTGCTCTGATTGCTTTCATGATGGGAGATTTGTCATTGGTCATTCAAGTATAGATTTCGTAAGGGTGGATTCAACGAGGGATTATGGTGAACTAGACGGGGATAATTGGACTGATCAAGAAACTTTACTACTTCTTGAGGCAATGGAGATTTACAATGAGAATTGGAATGAGATTGCTGAGCATGTTGGTACCAAGTCAAAAGCACAATGCATTCTTCATTTTCTCCGTCTACCCATGGAAGATGGAAAATTGGAAAATATTAATGTTCCAAGCATGTCTTTGTCATCCAATGCAATGGATAGAGATGGTAGTGGAAGACTGCATTGTTACTCAAACGGAGATACTGCAGGACCAGTCCATCAAACTCGAGATTCTGACAGCAGGCTTCCTTTTGCAAATTCTGGAAATCCTGTTATGGCTTTGGTTGCCTTTTTAGCCTCTGCAGTTGGACCAAGAGTAGCTGCTTCTTGTGCTCATGCAGCATTAGCAGTACTGTCAGTGGATAATTCTGGTAGCACTTCACAGGTGGAAGCACCGGGACATGATAATAGGACAAATTCCGAAAGCATACCTTGTCGAGATGGTGCGTCTCATGGAGAAACAGCAGTGTCAAATAATAATAATGAGGATAAGGCCAAGGTACATGGTTCATGGGGTCTAAATGATGGTAGGACAACCCCACTATCTGCTGAGAAAGTTAAAGATGCAGCTAAAGCAGGCCTCTCTGCAGCAGCAATGAAAGCAAAATTATTTGCCGATCATGAAGAGCGAGAAATTCAGAGATTGTGTGCTAACATAGTTAATCATCAGCTGAAAAGATTAGAATTGAAGCTGAAACAGTTTGCGGAAATTGAAACATTGTTGATGAAAGAATGCGAACAACTGGAGAGAACAAAGCAAAGGTTTGCTGCTGAACGGTCTCGCGTAATATCAGCACGTCTTGGAACTGCGGGAGCCACACCCACAATGACTGCATCGGGTGTTGGTCCTTCAATGGCTAGCAATGGCAACAACAGGCAACAAATGATCTCTGCTTCTCCCTCACAGCCCAGCATCTCAGGGTATGGCAGCAACCAACCAGTTCATCCACATATGTCCTTTGCCCCACGACCTACGATGTTTGGGTTGGGACAAAGATTACCGCTATCTATGATACAACAATCACAATCAGCTTCTTCAACTGCCATGTTCAATGCCCCTAGTAATGTGCAGCCCACGACCAATCATCCATTGTTGAGGCCTGTATCAGGAACTAACTCTGGTTTAGGTTAA 2364 0.4636 MPASPSENRTRWRKRKRDSQITRRHPKHEEEEDDEEENPNAEDDHAEREYDSEEQTHHHPNHPNSQPHLETEVLSDHGIPISQFPAVIKRSVNRPHSSVTAIVALERALESGDNKAQSALTPPVLENVSHGQLQALSSVPSDNFAFDGDSSFVITPPAILEGRGVVKRFGAKVLVVPMHSDWFSPATVHRLERQAVPHFFSGKSADHTPEKYMECRNCIVALHLEDPGKRITVSDCQGLLTGVDVEDLTRIVRFLDHWGIINYCVQMPSLESPNFMSCLREEPGGEVRVPAEALKSIDSLIKFDNPICKLKADEIYSSLTAHNANVFDLEDRIREHLSDNHCNYCSRPLPVVYYQSQKEVDILLCSDCFHDGRFVIGHSSIDFVRVDSTRDYGELDGDNWTDQETLLLLEAMEIYNENWNEIAEHVGTKSKAQCILHFLRLPMEDGKLENINVPSMSLSSNAMDRDGSGRLHCYSNGDTAGPVHQTRDSDSRLPFANSGNPVMALVAFLASAVGPRVAASCAHAALAVLSVDNSGSTSQVEAPGHDNRTNSESIPCRDGASHGETAVSNNNNEDKAKVHGSWGLNDGRTTPLSAEKVKDAAKAGLSAAAMKAKLFADHEEREIQRLCANIVNHQLKRLELKLKQFAEIETLLMKECEQLERTKQRFAAERSRVISARLGTAGATPTMTASGVGPSMASNGNNRQQMISASPSQPSISGYGSNQPVHPHMSFAPRPTMFGLGQRLPLSMIQQSQSASSTAMFNAPSNVQPTTNHPLLRPVSGTNSGLG* 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01466 787 Coils Coil 616 636 - -
Lapu9g01466 787 MobiDBLite consensus disorder prediction 1 69 - -
Lapu9g01466 787 MobiDBLite consensus disorder prediction 533 589 - -
Lapu9g01466 787 ProSiteProfiles Myb-like domain profile. 392 442 IPR001005 -
Lapu9g01466 787 MobiDBLite consensus disorder prediction 43 65 - -
Lapu9g01466 787 FunFam SWI/SNF complex subunit SMARCC2 isoform C 396 446 - -
Lapu9g01466 787 Gene3D - 396 446 - -
Lapu9g01466 787 ProSiteProfiles Zinc finger ZZ-type profile. 337 391 IPR000433 GO:0008270
Lapu9g01466 787 Pfam Myb-like DNA-binding domain 399 441 IPR001005 -
Lapu9g01466 787 SUPERFAMILY Homeodomain-like 397 450 IPR009057 -
Lapu9g01466 787 Pfam SWIRM domain 177 263 IPR007526 GO:0005515
Lapu9g01466 787 ProSiteProfiles SANT domain profile. 395 446 IPR017884 -
Lapu9g01466 787 MobiDBLite consensus disorder prediction 533 556 - -
Lapu9g01466 787 CDD SANT 399 441 IPR001005 -
Lapu9g01466 787 Gene3D - 180 267 IPR036388 -
Lapu9g01466 787 SMART sant 396 444 IPR001005 -
Lapu9g01466 787 SUPERFAMILY Homeodomain-like 173 268 IPR009057 -
Lapu9g01466 787 ProSiteProfiles SWIRM domain profile. 174 272 IPR007526 GO:0005515
Lapu9g01466 787 Pfam SWIRM-associated region 1 603 680 IPR032451 -
Lapu9g01466 787 PANTHER SWI/SNF COMPLEX-RELATED 389 674 - -
Lapu9g01466 787 MobiDBLite consensus disorder prediction 750 787 - -
Lapu9g01466 787 FunFam SWI/SNF complex subunit SMARCC2 isoform c 180 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01466 Lapu-Chr9 29021870 29031051 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01466 342 438 EF-hand Containing Proteins AT3G07740 33.962 1.08e-10 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01466 K11649 - gmx:100780440 1415.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01466 9 29021870 29031051 Lapu9g01466 9 29021870 29031051 ECH