Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01431 ATGGCTAACAACGCTACTGCCTGTGCTGAGAGAGCAACTAGTGACATGCTCATTGGACCGGACTGGGCTATCAACATAGAGTTGTGTGATATCATTAATATGGACCCGGGGCAAGCAAAGGATGCATTGAAGATACTCAAAAAGCGTTTGGGCAGTAAAAATCCTAAAATACAGCTTCTGGCACTTTTCGTATTGGAGACCCTTAGTAAAAACTGTGGTGAAAGTGTATTTCAGCAGATAATCGAGCGAGATATCTTACATGAAATGGTTAAGATAGTGAAGAAGAAGCCTGATTTAAATGTGAGGGAAAAGATACTGATTTTGATTGATACATGGCAAGAAGCTTTTGGGGGGCGAACTGGGGTTTATCCTCAATATCATGCAGCGTATAATGAATTGAAGTCTGCTGGAGTTGAGTTTCCACCACGAGATGAGAATAGTGTACCATTCTTCACTCCTCCTCAAACTCAGCCAATTGTTCACTCTGCTGAAGAATATGATGATGCTACTATTCAGGCTTCTCTCCAGTCAGATGCATCTGGCCTTAGTTTGACAGAGATTCAAAATGCTGAAGGAGTAGCTGATGTGTTGATGGAAATGCTTAGTGCCTTGAATCCTAAAGACCATGAGGGTGTGAAGGAGGAAGTGATTGTTGACCTTGTTGACCAGTGCCGTTCATACCAGAAGCGGGTCATGTTTCTTGTGAACAGTACTACGGATGAGCAGCTTTTAGGTCAGGGATTGGCACTGAATGACAGCCTTCAGCGAGTGCTCCGTAGACATGATGATATTGTGAATGGAACTGCTGATACAGGTGCTACTAGAGAAGCAGAAACTGCGGTTCTGCCACTTGTAAATGTAAGCCATGAAGATGATGAAGCAGAAGAGGATTTTGCTCAACTAGCCCATAGGTCATCACGTGATGCTCATGCTCAGAATCGGAAATCAGTCTATGACAAGGCAGAACCAGGGAGGATAAACCCAGTTATTCCCCCACCACCAGCATCAAAGAAGCCCGTCTACTCGGGCACTAGTATGGTTGACTATCTCAGTGGTGATACATACAAGACTGAAGGATCTCCTCAAAACTCTGAACCCACCTCATTTGCAGCTCCTGTCCATTCTAGCCCTAATCCAACCTCATCATTGTCTTCATCTCGTCCCCACGCCGTGAGTACCTCATCACCAATTTTTAGCAGCCAGCCTGTGTATGATGAACAACCATCTTCTGTGGACAAATCTTCGGAGCGTCTGCCTCCAGCTCCCTGGGACAGTCAATCTCATAGCATCATTCCACCCCCACCTTCAAAGTATAATCAGAGACAACAGTTTTTTGAGCAACAAGGTGCATCCCATTCAAGTAGTGGATCCAGTTCCTCTTATGACAGCTTGGTGGGACAAACTCAAAATCTCTCGCTGAATTCATCCACCCCAACCAAAGAACAGAAGCCAGAAGATGCCCTTTTCAAAGATCTTGTTGATTTTGCAAAATCCAAAACCTCATCATCTTCCAAGCCCAATAGGTCATATTGA 1533 0.4455 MANNATACAERATSDMLIGPDWAINIELCDIINMDPGQAKDALKILKKRLGSKNPKIQLLALFVLETLSKNCGESVFQQIIERDILHEMVKIVKKKPDLNVREKILILIDTWQEAFGGRTGVYPQYHAAYNELKSAGVEFPPRDENSVPFFTPPQTQPIVHSAEEYDDATIQASLQSDASGLSLTEIQNAEGVADVLMEMLSALNPKDHEGVKEEVIVDLVDQCRSYQKRVMFLVNSTTDEQLLGQGLALNDSLQRVLRRHDDIVNGTADTGATREAETAVLPLVNVSHEDDEAEEDFAQLAHRSSRDAHAQNRKSVYDKAEPGRINPVIPPPPASKKPVYSGTSMVDYLSGDTYKTEGSPQNSEPTSFAAPVHSSPNPTSSLSSSRPHAVSTSSPIFSSQPVYDEQPSSVDKSSERLPPAPWDSQSHSIIPPPPSKYNQRQQFFEQQGASHSSSGSSSSYDSLVGQTQNLSLNSSTPTKEQKPEDALFKDLVDFAKSKTSSSSKPNRSY* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01431 510 ProSiteProfiles VHS domain profile. 12 141 IPR002014 GO:0035091|GO:0043130
Lapu9g01431 510 Pfam VHS domain 9 136 IPR002014 GO:0035091|GO:0043130
Lapu9g01431 510 SMART VHS_2 5 137 IPR002014 GO:0035091|GO:0043130
Lapu9g01431 510 Gene3D - 175 273 IPR038425 -
Lapu9g01431 510 PIRSF TOM1 1 509 IPR014645 -
Lapu9g01431 510 SUPERFAMILY ENTH/VHS domain 3 142 IPR008942 -
Lapu9g01431 510 MobiDBLite consensus disorder prediction 430 482 - -
Lapu9g01431 510 SUPERFAMILY GAT-like domain 140 267 - -
Lapu9g01431 510 Gene3D - 2 158 IPR008942 -
Lapu9g01431 510 MobiDBLite consensus disorder prediction 347 409 - -
Lapu9g01431 510 PANTHER TOM1-LIKE PROTEIN 1 506 IPR044836 GO:0035091|GO:0043130|GO:0043328
Lapu9g01431 510 CDD GAT_GGA-like_plant 186 264 - -
Lapu9g01431 510 MobiDBLite consensus disorder prediction 302 321 - -
Lapu9g01431 510 CDD VHS 5 135 - -
Lapu9g01431 510 FunFam TOM1-like protein 2 4 151 - -
Lapu9g01431 510 Pfam GAT domain 193 267 IPR004152 GO:0035091|GO:0043130
Lapu9g01431 510 ProSiteProfiles GAT domain profile. 178 266 IPR004152 GO:0035091|GO:0043130
Lapu9g01431 510 MobiDBLite consensus disorder prediction 302 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01431 Lapu-Chr9 28606404 28613108 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01431 - - gmx:100792343 851.277