Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01422 ATGGCTAAAGTTTGTTGGCCATATTTTGATCCCGAGTATGAGAACTTCAGCAATAGAATGAACCCTCCAAGGGTCTCTGTGGACAATGCTAGTTGCCATGGCTGTACACTGATCAAGGTTGATAGTGTTAACAAACCTGGAATTCTGCTGGAAGTCGTGCAAATCTTGACCGACCTTGACTTCATAATTACCAAAGCTTACATATCTTCTGACGGCGGCTGGTTTATGGATGTCTTTCATGTCACGGATCAGCAAGGAAGAAAGATAACAGATAGTAAAACCATCGACTTCATTGAAAAGGCTCTAGGACCAAAGAGCCAGAGCTCAGAAGGGGTGAAAAATTGGCCAAGCAAAACGGTTGGAGTGCATTCTGTTGGTGATCATACAGCCATTGAACTGATTGGCAGAGATCGCCCTGGTCTCTTGTCTGAGATTTCAGCTGTTCTTGCCAACCTCCATTTTAATGTTTTTGCTGCAGAAGTGTGGACTCATAACAGGCGAATTGCTTGCGTTCTTTATGTCAATGATGCTACAAACCGAGCTGCTGTGGACGAGCCAAGCAGATTATCTCTAATGGAGGAGCAGCTCAACAACATCTTACGCGGATGTGATGGTGAGAAAGTTGCTAGGACTAGTTTCTCCATGGGTTTCACCCACATGGATCGGCGGCTTCACCAAATGTTGTTTGCTGATCGGGATTATGAAAGTTATAGAGTAGCAAGAGACGTTAATTGTCCTCTCTCTTTCAGGCCCAAAATCACAATAGAACGTTGTGAGGAGAAAGGGTACTCAGTGGTCACAGTCAAGTGCAAGGATCGGGCAAAACTCATGTTTGACATTGTTTGCACTCTTACTGATATGCAATATGTTGTTTTCCATGCCACAGTCTCGTCGGATGGCCCTTATGCATCCCAGGAGTATTTTATTCGACATATGGATGGATGCACACTTGACACTGAAGGAGAGAAAGAAAGGGTCATCCAATGCATTGAAGCTGCTATTCGAAGAAGAGTAAGCGAGGGTGTGAGCCTTGAGCTATGTGCAAAGGACAGAGTTGGCTTGTTGTCTGAAGTAACAAGGATTCTACGAGAGAATGGGTTGACAGTGTGTAGGGCAGGTGTATCAACCAGAGGGGAGCAAGCATTGAATGTGTTCTACGTGAGGGATGCATCAGGGAACCCAGTGGACATGAAAACCGTGGAAGCACTTCGTAAAGAAATAGGTAAGACAATGATGGTTGATGTGAAGAGAGTGCCAACCAATGCCAATGTACCAGAGACTCGAGGATGGGCTAAAACCAGTTTCTTCTTTGGTAACTTGTTGGAAAGGTTCTTGACCTGA 1341 0.4489 MAKVCWPYFDPEYENFSNRMNPPRVSVDNASCHGCTLIKVDSVNKPGILLEVVQILTDLDFIITKAYISSDGGWFMDVFHVTDQQGRKITDSKTIDFIEKALGPKSQSSEGVKNWPSKTVGVHSVGDHTAIELIGRDRPGLLSEISAVLANLHFNVFAAEVWTHNRRIACVLYVNDATNRAAVDEPSRLSLMEEQLNNILRGCDGEKVARTSFSMGFTHMDRRLHQMLFADRDYESYRVARDVNCPLSFRPKITIERCEEKGYSVVTVKCKDRAKLMFDIVCTLTDMQYVVFHATVSSDGPYASQEYFIRHMDGCTLDTEGEKERVIQCIEAAIRRRVSEGVSLELCAKDRVGLLSEVTRILRENGLTVCRAGVSTRGEQALNVFYVRDASGNPVDMKTVEALRKEIGKTMMVDVKRVPTNANVPETRGWAKTSFFFGNLLERFLT* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01422 446 FunFam ACT domain repeat 6 341 418 - -
Lapu9g01422 446 CDD ACT_ACR_4 341 412 - -
Lapu9g01422 446 Gene3D - 338 421 - -
Lapu9g01422 446 ProSiteProfiles ACT domain profile. 37 114 IPR002912 -
Lapu9g01422 446 SUPERFAMILY ACT-like 339 410 IPR045865 -
Lapu9g01422 446 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 10 416 IPR040217 -
Lapu9g01422 446 Pfam ACT domain 130 199 IPR002912 -
Lapu9g01422 446 Pfam ACT domain 37 86 IPR002912 -
Lapu9g01422 446 ProSiteProfiles ACT domain profile. 343 420 IPR002912 -
Lapu9g01422 446 Gene3D - 128 201 - -
Lapu9g01422 446 SUPERFAMILY ACT-like 125 202 IPR045865 -
Lapu9g01422 446 CDD ACT_ACR_3 263 337 - -
Lapu9g01422 446 CDD ACT_ACR_1 35 105 - -
Lapu9g01422 446 CDD ACT_ACR_2 129 202 - -
Lapu9g01422 446 ProSiteProfiles ACT domain profile. 130 210 IPR002912 -
Lapu9g01422 446 SUPERFAMILY ACT-like 32 106 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01422 Lapu-Chr9 28512688 28538250 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01422 - - gmx:100789173 853.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01422 9 28512688 28538250 Lapu9g01422 9 28512688 28538250 ECH