Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01406 ATGGATTTGATCAAGGCTTGGAGGTTGAGCCCTTGCGTAGGTGCAATACCCTTACCACCACTTGTCACTCTTACTGGTGTTAGCTTCTGTGCCCCTTCTCTCTCTACAACAAAACTCTCTTATCAGTTTCTCGCCACTACAACCACTCCTAGAAACCCTTTCACTCCAATTCCACGTGGCAGAAAGACAGACTCTGAGTCAGAGCCGCTTCTAGAACCCTCTATTCTCCCAGAACTATCATTCCAAGAAGAAGAAGAAGAAGAAGAAGTAGAAGAAGAAGAATTCCTCGACGAACATGAATACGAGACGGCGTTGGATGACGCTGATGATGATGAAGACGATGGTGACGATGGCCAATACTATGACGAAGAGGAGGAGGCTGGTGTGCCTTATGCAGGTGATGGCGGCGCAGGTGGTGGAATCTCCCTCTCCGGCACATGGTGGGACAAAAAAGCTTTAGCCATTGCTAAAGAGGTTACTCTCTCTTTTGATGGCGAATTGCAAATTTATGCTTTTAAAACACTGCTTAACTCCACCATTCAAGTGCGCATAGAGAACCTTTCCAAAAAGTCTGGTTCCCCTAGCATGGAAGATATTGAAGCCTTCTCTGCAGCGTATAGAGCAAAATTGGATGAAGCAGAACTTGCTAAATCTGTTCCTGACAATTTATGTTTGGAGGTGTCTTCTCCTGGTGTTGAAAGAATAGTTCGGATTCCAGATGACCTAGATCGATTCAAGGGCCGATCTATGTATGTGAAATATGTGACTAATAATGATCCAAATAACCCAGCTGCAGAGAGTGATGGTGTCTTCATGCTTGAATCCTTTGACATGGTAACAAAATGTTGCACCTGGGGTTTAGCAGATGTGAAAGTCAACAGACAGAAATCAGGTAAAGGAAGACCACTGAATAAAAAGCAAAGAGAATGGCGTTTAAGCATTCCCTTTGATTCCTTACGTTTTGTACGGTTGCACTCTGATATTTAA 987 0.4397 MDLIKAWRLSPCVGAIPLPPLVTLTGVSFCAPSLSTTKLSYQFLATTTTPRNPFTPIPRGRKTDSESEPLLEPSILPELSFQEEEEEEEVEEEEFLDEHEYETALDDADDDEDDGDDGQYYDEEEEAGVPYAGDGGAGGGISLSGTWWDKKALAIAKEVTLSFDGELQIYAFKTLLNSTIQVRIENLSKKSGSPSMEDIEAFSAAYRAKLDEAELAKSVPDNLCLEVSSPGVERIVRIPDDLDRFKGRSMYVKYVTNNDPNNPAAESDGVFMLESFDMVTKCCTWGLADVKVNRQKSGKGRPLNKKQREWRLSIPFDSLRFVRLHSDI* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01406 328 PANTHER OSJNBA0006B20.18 PROTEIN 60 328 - -
Lapu9g01406 328 SUPERFAMILY YhbC-like, N-terminal domain 177 233 IPR035956 -
Lapu9g01406 328 MobiDBLite consensus disorder prediction 49 121 - -
Lapu9g01406 328 MobiDBLite consensus disorder prediction 79 121 - -
Lapu9g01406 328 Hamap Ribosome maturation factor RimP [rimP]. 150 328 IPR003728 GO:0042274
Lapu9g01406 328 Pfam RimP N-terminal domain 177 233 IPR028989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01406 Lapu-Chr9 28288389 28291166 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01406 - - gmx:100783320 424.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01406 9 28288389 28291166 Lapu9g01406 9 28288389 28291166 ECH