Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01405 ATGGTGGTCACTTCCTCTGCGCGTGATTATATCAACCGCATCTTGCAAGACATCTCCGGCATGAAGGTTCTAATCCTTGATTCTCAAACGGTAGGTGTTGTCAGTGTTGTGTATTCGCTGTCAGAGCTTCTCCAGAAAGAAGTGTTTTTGGTTGAGTTGGTAGATTCTATATCCAAGTCAAACGAATCAATGTCGCATCTCAAGGCCATTTACTTCCTTCGACCTTCATCGGAGAATATCCAGCTTTTGCGCCGCCAGCTGGCTAGTCCTAGATTTGGAGAGTATCACCTATTTTTCTCCAACATATTGAAGGACACTCAGATTCATATACTTGCTGATTCAGATGAACAGGAAGTTGTCCAGCAAGTTCAGGAGTTCTATGCGGATTTTGTTGCAATTGATCCTTATCATTTCACTTTCCATGTGCCTTCACACTACATATATATGCTCCCAGCTGTGATAGATCCTTCAACAGTGCAGCGCTTTTGTGACCGAGTCGTTGATGGTCTTGCAGCTGTTTTTTTGGCATTAAAACGCAGACCAGTAATTAGGTATCAAAGGACATCTGACATTGCAAAAAGGATAGCACAGGAAGCAGCTAAATTGATGTACCAAGAGGAAAGTGGTCTTTTTGATTTTAGGCGAATGGAAGTTTCTCCACTGTTGTTAGTGATTGACAGGAGGGATGATCCTGTCACCCCGTTGCTAAATCAATGGACCTATCAGGCTATGGTTCATGAATTAATAGGAATACAAGACAACAAAGTGGACTTAAAATCCATTGGTAAATTTCCAAAAGATCAGGAGGAGGTTGTGTTGTCATCGGAACAAGATCCCTTTTTCAAGTCTAACATGTATGAGAATTTTGGAGATATAGGTATGAATATCAAGCGAATGGTTGATGAATTTCAGCAAGTGTCAAAAAGTAACCAGAACATCCAAACAATAGAGGACATGGCCAAATTTGTTGATAATTATCCTGAGTACAGAAAAATGCATGGAAATGTGACAAAACATGTGACTTTGGTAACTGAAATGAGCAAGATAGTTGATGAGCGAAAGCTTATGTTAGTTTCACAAACAGAACAGGAGTTGGCTTGCAATGGAGGACAAGGAGCTGTTTTTGAGGCAGTGACGAATCTACTAAACAATGAAAGCATATCAGATCTGGACCGACTACGTTTAGTCATGTTGTATGCTTTACGATATGAGAAAGATAGCCCTGTTCAGTTAATGCAGCTCTTCAACAAACTAGCTTCCAGATCTGCCAAGTACAAACCTGGGCTTGTCCAGTTTCTTCTAAAGCAAGCAGGTGTTGACAAGAGAATGGGTGATCTTTTTGGAAATCGAGATCTAATGAATATTGCCCGTAACATGGCTCGTGGTTTGAAGGGTGTTGAGAATGTTTACACCCAGCATCAGCCACTTCTGTTTCAAATCATGGAAAGCATTGTCAAGGGGAGGTTGAGAGATGTGGACTACCCATTTGTTGGAAATCACTATCAACAGGGAAGGCCGCAGGATGTAATCATCTTCATTGTTGGTGGGACAACTTATGAGGAGTCTCGGTCTGTTGCTTTACAAAATGCCAACAATACCGGCATTCGTTTTATACTTGGTGGCTCTTCTGTTCTTAATTCTAAAAGGTTTTTAAGGGACTTGGAAGAAGCTCAAAGGGTAGCTCGTTCTAGCACCACTGTTGTTTGA 1707 0.413 MVVTSSARDYINRILQDISGMKVLILDSQTVGVVSVVYSLSELLQKEVFLVELVDSISKSNESMSHLKAIYFLRPSSENIQLLRRQLASPRFGEYHLFFSNILKDTQIHILADSDEQEVVQQVQEFYADFVAIDPYHFTFHVPSHYIYMLPAVIDPSTVQRFCDRVVDGLAAVFLALKRRPVIRYQRTSDIAKRIAQEAAKLMYQEESGLFDFRRMEVSPLLLVIDRRDDPVTPLLNQWTYQAMVHELIGIQDNKVDLKSIGKFPKDQEEVVLSSEQDPFFKSNMYENFGDIGMNIKRMVDEFQQVSKSNQNIQTIEDMAKFVDNYPEYRKMHGNVTKHVTLVTEMSKIVDERKLMLVSQTEQELACNGGQGAVFEAVTNLLNNESISDLDRLRLVMLYALRYEKDSPVQLMQLFNKLASRSAKYKPGLVQFLLKQAGVDKRMGDLFGNRDLMNIARNMARGLKGVENVYTQHQPLLFQIMESIVKGRLRDVDYPFVGNHYQQGRPQDVIIFIVGGTTYEESRSVALQNANNTGIRFILGGSSVLNSKRFLRDLEEAQRVARSSTTVV* 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01405 568 Gene3D - 353 474 - -
Lapu9g01405 568 PIRSF VPS45_Sec1 1 565 IPR001619 GO:0016192
Lapu9g01405 568 PANTHER VESICLE PROTEIN SORTING-ASSOCIATED 14 554 IPR001619 GO:0016192
Lapu9g01405 568 FunFam Vacuolar protein sorting-associated protein 45 homolog 353 474 - -
Lapu9g01405 568 Pfam Sec1 family 22 553 IPR001619 GO:0016192
Lapu9g01405 568 FunFam Vacuolar sorting protein 2 128 - -
Lapu9g01405 568 Gene3D - 2 128 IPR043154 -
Lapu9g01405 568 Gene3D Syntaxin Binding Protein 1; Chain A, domain 2 238 352 IPR043127 -
Lapu9g01405 568 Gene3D - 153 555 IPR027482 -
Lapu9g01405 568 SUPERFAMILY Sec1/munc18-like (SM) proteins 5 556 IPR036045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01405 Lapu-Chr9 28278626 28287468 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01405 K12479 - gmx:100782786 1056.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01405 9 28278626 28287468 Lapu9g01405 9 28278626 28287468 ECH