Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01396 ATGCCACCAGCAGTGTCATCTACTTTTGCGTCAGAGAGAGACCCTGTGATATATGTGCATACAGTTTCAGAGGCTGGTCGCCTTCTTCCTTCAGCTAGCCGCTGGAATTCCATAGCACTTGACTTTAAACTTGCTCCCGACTCTTCCACTGCCTATGAATCTATCCCTTCCCAATACCCAAAATCTGTTGACTACAATCTTGTTATCACTGACAGGAAGCACTTTCATTGCTTTATTTTTGTTCTTGTAACAATAATTTTTGCCATCCTAGCAGCTGTTCTGTTGGTGCATTTTTTACCTCGGAAGCACAAGCATCAAGGGTCTTCAATCAATCTCAAAGTGGCAATAAACCAGGCTCTAACATTTTATGATGCCCAAAAATCTGGGTATTATCCAAGGAACAGTCCAGTGAAATTTCGAGGAGATTCAGGATTACAAGATGGGGATTCGGCTAAGACTGATCTTATTGGTGGATTTTATGATTCTGGCAACAACATTAAGTTTACCTTCACCACAGCTTATACTATGACCATGTTGAGTTGGACTGTCATGGAATATCAAAGTAAATATGCTGATATTGGTGAACTTGATCATGTTAGGGACATCATTAGATGGGGTAGTGACTACCTGCTCAAGGTTGGAAGTACCATTAGTATTAACAATGAACCTAATGATGTGAGTTGTTGGCAACGACCCGAAGATATGAAATATGAGAGACCAGTTTCAATTTGCGATAGCTCTGCTACAGATTTAGCTGGTGAAATTGTGGCAGCATTATCTGCAGCATCGATGGTATTCAAAGAAGACAGAGATTACTCAAAGAGACTTGTGCAAGCAGCAGAAAGCATCTTTGGGGCAATACCTACAGAACAAGGGACTTACACCATGGTTGATGTATGTGGAAAACAATCAAGAATGCTCTATAACTCGACCAGCTACCAAGATGAGTTGGCTTGGGGAGCAACATGGTTATTTCTTGCTACTGAAAATACTAATTACCTTGCAACTGCAACTGCAACTCTTTTTTCAGCCAAGAGTAATGAATCAAGAGTTGACAAAGGGGTTGTTTACTGGAATAACAAGCTCAATGCTGTGGAGGTTTTGCTAACCGGTATTCGATACTTCCGTGATCCTGGATTCCCATACGAGGATGCTTTGAAACTTTCATCTAACTCTACCGATGCCCTCATGTGTTCTTATCTATTCAATAAATTCTTTAGCAGGACACCTGGTGGATTGATTATCCTGAAACCTGATAATGAACCATTACTCCAGTTTGCTGCTACAGCATCTTTTCTCAGTAAATTATACAGCGATTATCTTGATCATCTCAAAATGTCCAGTGCAAGTTGCAAGACTGATGCGTTCTCCGTGAAAATGCTTCGTGATTTTGCCACTTCTCAGGTTAACTACATCTTGGGGCAGAACCCTATGAAAATGAGTTATTTAGTGGGCTATGGTGACAGGTATCCTGTCCAAGTTCATCACAGAAGTGCATCAATCCCTTGGAATAACCAACCTTACAATTGTGACGACGGTAAGAGATGGCTAAACTCAAAAGATCCAAATCCACAGGTTCTTTTGGGAGCCATGGTGGGAGGGCCAGACAATAATGATAATTTCATGGATCAGAGGACCAACAAAAAGTTCACTGAACCGAACATAGCCAGCAATGCAGGCTTAGTTGCAGCACTGATTGCGCTTCAAGATCCTCCTTATAATTCACGTGACTTAAAAAGCACATTGTGGGGATGGACTTGA 1761 0.414 MPPAVSSTFASERDPVIYVHTVSEAGRLLPSASRWNSIALDFKLAPDSSTAYESIPSQYPKSVDYNLVITDRKHFHCFIFVLVTIIFAILAAVLLVHFLPRKHKHQGSSINLKVAINQALTFYDAQKSGYYPRNSPVKFRGDSGLQDGDSAKTDLIGGFYDSGNNIKFTFTTAYTMTMLSWTVMEYQSKYADIGELDHVRDIIRWGSDYLLKVGSTISINNEPNDVSCWQRPEDMKYERPVSICDSSATDLAGEIVAALSAASMVFKEDRDYSKRLVQAAESIFGAIPTEQGTYTMVDVCGKQSRMLYNSTSYQDELAWGATWLFLATENTNYLATATATLFSAKSNESRVDKGVVYWNNKLNAVEVLLTGIRYFRDPGFPYEDALKLSSNSTDALMCSYLFNKFFSRTPGGLIILKPDNEPLLQFAATASFLSKLYSDYLDHLKMSSASCKTDAFSVKMLRDFATSQVNYILGQNPMKMSYLVGYGDRYPVQVHHRSASIPWNNQPYNCDDGKRWLNSKDPNPQVLLGAMVGGPDNNDNFMDQRTNKKFTEPNIASNAGLVAALIALQDPPYNSRDLKSTLWGWT* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01396 586 SUPERFAMILY Six-hairpin glycosidases 110 569 IPR008928 GO:0005975
Lapu9g01396 586 Pfam Glycosyl hydrolase family 9 115 565 IPR001701 GO:0004553|GO:0005975
Lapu9g01396 586 Gene3D - 109 571 IPR012341 GO:0005975
Lapu9g01396 586 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 471 497 IPR018221 -
Lapu9g01396 586 PANTHER ENDO-1,4-BETA-GLUCANASE 86 569 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01396 Lapu-Chr9 28209511 28211907 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01396 61 568 Glycoside Hydrolase AT5G49720 45.149 1.82e-145 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01396 K01179 - gmx:100805472 1048.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01396 9 28209511 28211907 Lapu9g01396 9 28209511 28211907 ECH