Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01383 ATGGCTTCGGAGCAAATCGAGCGAGCTGCAATTGAAACGAACAATGAGGATACAAAATTGACGGAAAGTTCTTCTCTTCCTCCATCATCCAATGCTCAAAACTTGGGAATCACAGAACGATCATTCTCTGCCGCAGTCGCCGCCTTCCTTTCAGTTATCATTGCCAATCCCCTCGATGTTGCCAAGACAAGGTTGCAAGCGCAAGCAGCAGGAATTGCATATTCTCATCCACTCGGTAATATGACTAGTAGAATGGCTTGTTTTGGCCCAAATATGATGTTTGCTGATTTAAGATGTTCTCCATCATGTCACCGAGCTGGAATCCAGGGCACAGTGTCCATCTGTCCTCCTGAGTGTTTTCGCTACAAAGGAACACTGGATGTCATCCACAAAATTATACATCAGGAGGGATTTGCTAAGCTGTGGAGAGGCACAAATGCTGGCCTGGCTCTTGCAGTACCAACTGTGGGAATTTACCTTCCTTGCTATGACATATTACGCAATTGGATGGAGGATTTCACAGCTAAAAATGCACCAACTGCAGCTCCTTATGTACCATTAGTGGCTGGCTCATTGGCACGCTCTCTAGCTTGTGCAACTTGCTATCCTATTGAACTTGCTAGAACTCGTATGCAGGCATTTAAAGTGACTCAAATGGATAAAAAGCCTCCTGGAGTGTTTCAGACTCTGCTAGGTGTTCTCTCGCATGTCAAAAGCATAAATAGTCCACAAAACAATTTGCAAGGTTATCGTCTTTTGTGGACTGGCATGGGGTCTCAACTAGCCCGTGATGTACCCTTCTCGGCCATTTGTTGGTCGACACTTGAACCAACTAGAAGAAAACTTCTTAGTTTTGTTAGACATGATGAGGCCAATGTGTTTAGTGTTCTTGGCGCAAATTTCGGAGCTGGTTTTGTTGCAGGAACTTTAGCAGCTGGAGCTACATGTCCTTTAGATGTTGCAAAGACTCGAAGGCAGATAGAGAGAGATCCTATTAAGGCATTGAAAATGACTACAAGACAAACATTAACAGACGTGTGGAGAGATGGAGGCTTGAAAGGGTTGTTTGCAGGTTTTGGTCCACGAGTTGGTCGATTAGGCCCTTCCGTTGGATTCGTGATTTCGTTTTATGAGGTTGTAAAGTTTGTTCTTCATCCTCAGCACAAAACATCATCATGA 1179 0.4436 MASEQIERAAIETNNEDTKLTESSSLPPSSNAQNLGITERSFSAAVAAFLSVIIANPLDVAKTRLQAQAAGIAYSHPLGNMTSRMACFGPNMMFADLRCSPSCHRAGIQGTVSICPPECFRYKGTLDVIHKIIHQEGFAKLWRGTNAGLALAVPTVGIYLPCYDILRNWMEDFTAKNAPTAAPYVPLVAGSLARSLACATCYPIELARTRMQAFKVTQMDKKPPGVFQTLLGVLSHVKSINSPQNNLQGYRLLWTGMGSQLARDVPFSAICWSTLEPTRRKLLSFVRHDEANVFSVLGANFGAGFVAGTLAAGATCPLDVAKTRRQIERDPIKALKMTTRQTLTDVWRDGGLKGLFAGFGPRVGRLGPSVGFVISFYEVVKFVLHPQHKTSS* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01383 392 ProSiteProfiles Solute carrier (Solcar) repeat profile. 35 169 IPR018108 -
Lapu9g01383 392 ProSiteProfiles Solute carrier (Solcar) repeat profile. 181 281 IPR018108 -
Lapu9g01383 392 Gene3D Mitochondrial carrier domain 2 87 IPR023395 -
Lapu9g01383 392 MobiDBLite consensus disorder prediction 1 32 - -
Lapu9g01383 392 Gene3D Mitochondrial carrier domain 105 388 IPR023395 -
Lapu9g01383 392 SUPERFAMILY Mitochondrial carrier 37 379 IPR023395 -
Lapu9g01383 392 Pfam Mitochondrial carrier protein 35 170 IPR018108 -
Lapu9g01383 392 Pfam Mitochondrial carrier protein 299 384 IPR018108 -
Lapu9g01383 392 Pfam Mitochondrial carrier protein 185 282 IPR018108 -
Lapu9g01383 392 MobiDBLite consensus disorder prediction 16 32 - -
Lapu9g01383 392 ProSiteProfiles Solute carrier (Solcar) repeat profile. 295 383 IPR018108 -
Lapu9g01383 392 PANTHER FI19922P1-RELATED 27 387 IPR045315 GO:1990542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01383 Lapu-Chr9 28055410 28060723 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01383 131 382 Organic Solute Cotransporters AT3G55640 27.799 1.83e-18 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01383 K15119 - gmx:100778501 634.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01383 9 28055410 28060723 Lapu9g01383 9 28055410 28060723 ECH