Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01269 ATGTCTCCAGGTCCCGTTGTCGACTCTTCCCCAGAGCTCCAAGCAGAGCAACCGGTTCTTTCCGACGACGCAACCCAGAAGAAGAAACCCCAACTGCAGGATGACGACGACGACGATGCTCCCGTTGTCGAGGACGTGAAGGACGATGCTGACGATGATGAAGACGATGATGATGACGACGATGATAAGGAAGATGGTGCTGAAGGTGCTGCTGAGGGATCGAAGCAGAGCAGAAGTGAGAAGAAGAGCCGAAAAGCAATGTTGAAGCTGGGACTAAAACCTGTTACTGGCGTTAGTAGGGTCACAATTAAGAGAACAAAAAATATTCTTTTCTTCATCTCAAAACCCGATGTGTTCAAGAGTCCAAATTCTGAGACCTACGTCATATTTGGGGAAGCAAAAATAGAGGACTTGAGCTCTCAGTTACAGACACAGGCTGCTCAACAGTTCAGGATGCCAGACATGGGATCTGTAACAGCGAAACAAGATCAAGATGCCGCAGCTGCAGCTGCACAGCCTGAAGAAGAGGAGGAGGTTGATGAAACTGGCATTGAGCTCCATGACATTGATTTGGTGATGACACAGGCAGGAGTGTCAAGAAGCAAGGCCGTCAAGGCACTCAAGACTCACGACGGGGACATTGTTGGAGCCATTATGGAACTCACTACTTAA 672 0.4881 MSPGPVVDSSPELQAEQPVLSDDATQKKKPQLQDDDDDDAPVVEDVKDDADDDEDDDDDDDDKEDGAEGAAEGSKQSRSEKKSRKAMLKLGLKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIEDLSSQLQTQAAQQFRMPDMGSVTAKQDQDAAAAAAQPEEEEEVDETGIELHDIDLVMTQAGVSRSKAVKALKTHDGDIVGAIMELTT* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01269 223 Gene3D - 86 139 IPR038187 -
Lapu9g01269 223 FunFam Nascent polypeptide-associated complex (NAC), alpha subunit 87 139 - -
Lapu9g01269 223 MobiDBLite consensus disorder prediction 157 180 - -
Lapu9g01269 223 CDD UBA_NAC_euk 188 222 - -
Lapu9g01269 223 ProSiteProfiles NAC A/B domain profile. 77 142 IPR002715 -
Lapu9g01269 223 PANTHER NASCENT POLYPEPTIDE ASSOCIATED COMPLEX ALPHA SUBUNIT-RELATED 22 222 IPR016641 GO:0005854
Lapu9g01269 223 Pfam NAC domain 80 135 IPR002715 -
Lapu9g01269 223 SMART NAC_2 80 136 IPR002715 -
Lapu9g01269 223 MobiDBLite consensus disorder prediction 1 85 - -
Lapu9g01269 223 CDD NAC_NACA 91 138 - -
Lapu9g01269 223 MobiDBLite consensus disorder prediction 68 85 - -
Lapu9g01269 223 Gene3D - 184 221 - -
Lapu9g01269 223 MobiDBLite consensus disorder prediction 37 67 - -
Lapu9g01269 223 Pfam HYPK UBA domain 185 222 IPR044034 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01269 Lapu-Chr9 26668845 26671065 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01269 K03626 - gmx:100780632 276.944
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01269 9 26668845 26671065 Lapu9g01269 9 26668845 26671065 ECH