Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01256 ATGGGTCAAAGCATCAAACTTACGACTGTCCCAGGTTGGTCAGGACGGATATGGGCACGGACTGGTTGTAAATTTGATGCAACTGGAGTTGGCAAATGCCAAACAGGTGACTGTGGAGGAAGGCTGGAATGTGAGGGAAATGGTGCTGCCCCTCCTACCTCACTGTTTGAGATAACACTTGGTGCAGGCAATGGACAAGACTACTATGATGTTAGCATGGTAGATGGCTACAATTTGCCATTACTCGCTCTACCACGAGGTGTATATGGTGGCGCCTGTAATGCCACAGGTTGTATTACAGATATTAACAGAGGTTGCCCAACAGAACTTCAAGTATTAGGAGGTGTCCAAAACCAAGGGGTAGTCGGGTGTAGGAGTGCTTGTGAGGCATTCAAGTTGGACAAGTATTGCTGCAGTGGAGAATTTGCAAATCCAAATACATGCCAGCCTTCCTATTATTCAAGCCTATTCAAGAAGGCTTGCCCAAGAGCTTATAGCTATGCGTTTGACGATGGCACCAGCACTTTCACTTGCAAAGCATACGAATACGATATTGTTTTCTGTCCCAACAGCAATAGGATGGAAAGACCAAATCCTGCATCTCCTCCTCCACCAATTAGACAGCCCTATTGGAAGCATAAGCAGGTCACTTCCTCATCAAATATTTTATTACCCTTTCCAGCGCCAATCTTTCTCTTGGTTCTCACTCTTACTTTCTTGGCATTTGTAAGACACGGCCAGTGA 744 0.457 MGQSIKLTTVPGWSGRIWARTGCKFDATGVGKCQTGDCGGRLECEGNGAAPPTSLFEITLGAGNGQDYYDVSMVDGYNLPLLALPRGVYGGACNATGCITDINRGCPTELQVLGGVQNQGVVGCRSACEAFKLDKYCCSGEFANPNTCQPSYYSSLFKKACPRAYSYAFDDGTSTFTCKAYEYDIVFCPNSNRMERPNPASPPPPIRQPYWKHKQVTSSSNILLPFPAPIFLLVLTLTFLAFVRHGQ* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01256 247 PRINTS Pathogenesis-related protein signature 179 188 IPR001938 -
Lapu9g01256 247 PRINTS Pathogenesis-related protein signature 29 58 IPR001938 -
Lapu9g01256 247 PRINTS Pathogenesis-related protein signature 16 27 IPR001938 -
Lapu9g01256 247 PRINTS Pathogenesis-related protein signature 67 83 IPR001938 -
Lapu9g01256 247 PANTHER OS03G0233200 PROTEIN 2 189 IPR001938 -
Lapu9g01256 247 Pfam Thaumatin family 2 189 IPR001938 -
Lapu9g01256 247 CDD TLP-PA 2 188 - -
Lapu9g01256 247 SMART tha2 2 189 IPR001938 -
Lapu9g01256 247 SUPERFAMILY Osmotin, thaumatin-like protein 2 190 IPR037176 -
Lapu9g01256 247 ProSitePatterns Thaumatin family signature. 29 44 IPR017949 -
Lapu9g01256 247 Gene3D Thaumatin 1 189 IPR037176 -
Lapu9g01256 247 FunFam THAUMATIN-LIKE PROTEIN 1 1 189 - -
Lapu9g01256 247 ProSiteProfiles Thaumatin family profile. 1 191 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01256 Lapu-Chr9 26533256 26534375 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01256 2 223 Receptor kinase-like Gene Family AT5G38280 43.363 1.68e-61 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01256 - - vum:124820392 482.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01256 9 26533256 26534375 Lapu9g01256 9 26533256 26534375 ECH