Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01209 ATGGATAATAAAAAAGAAAATTTGCCACCATCCCCACCTAGCAAGCTGTTATCAATTGATGAAGAACTTTGGAAGATGGCTGAAGAGAGGGTCCAAGAGATACTGTGGACAATTGAACCAAATGTGTTATCTGAGGAGAACAGAAAGGATGTTATTGACTATGTTCGGAGGCTGATAGGAGATTACTATGGAGCACATGTCTTGCCATTCGGTTCTGTTCCACTAAAAACCTACCTTCCTGATGGAGATATTGACTTGACAGCTCTCAGTCACGAAGACCCAGAGGAGGATTTGGCGCTAACAGTATGCAGTATACTTGAAAGAGAAGAGGACCCTGAATACCAAGTAAAAGACATACAACATATACCTGCACAGGTCCAGCTTGTGAAATGTACAGTGAAAAATATACCAGTTGACATCTCTTTCAATCAGATGGTTGGATTTTATACTATATACTTTTTGGAGCAGGTTGACCAGCTTGTTGGAAAGAACCATCTTTTCAAACGCAGTATTATCTTAATCAAAGCTTGGTGCTATTATGAAAGCCGAATTCTTGGTGCACACCATGGTCTGTTATCAACGTATGCGATAGAAATATTAGTCTTGTATATTGTCAATCGTTTTCATTCGTCACTGCGTGGTCCTCTAGAGGTTCTATACATATTTTTGGACTACTACGGCTCATTTGACTGGGACCACAACTATGCTAGTATATGGGGTCCAAAAGCCTTATCCTCCCTTCCAGAAATTGTTGAAACACCAGAATGTGATCAGGGTGGATTCTTGCTCCAGAAAGAGTTTCTGAGAAACTACAGGGATATGTGCTCTTTTAGTATAAGAGCATCCGAAACTGCGACTCCTGAATTTCAAGTTAAACTCATGAACATCTTGGATCCTCTAAGAAATGATAACAACGTAGGCCGTTGCGTCAACTTAGCCAATTTACATCGAATAAGATTAGCTCTTTCCTATGGAGCACGAAGGCTCAAGCAGGCCCTCACACTTCCAGGAGAAAACATGGGTTCAGCACTTGAGAAGTTTTTCTTCTGTACTTTGGAAAGGAATGGGAAAGGAGAAAGGGCAGATGTTGACATTCCTGTTTCTCCATTTGGTACTGGAAGATGTGAAGGGTCTGTCCTTGATGGAGACTATGGCGGTTACTATTTTGACTCACAATATGTTCAGCTATATCCTAAATATGCCATGCCAGTAACAACTGTACATTCCGGTTCTCCATCTTCACCTTCTCACGATGATATGCTTGCCCTATCAACCCAGCAAAACTGGAGTGAAGGTGATTTTCTGACATTACAGCAAAACTGGAGCATGTTTTATCAGAGTGGTAGCAATGTATACATCCCGGGACAGATACTGTATCATCCAACCTACAACAGCATTGATGAAGGAGTAAAATCACGAGGAACAGGAACATATATACCTGATTTGAACTATAATTCCTACTGGGATATACGCGCAAATGTGAACAGACCAAGGAAAATTCCTTTTGCAAAGTACAATGCATCGCCCAAATCACCTCCTACAAAGCAACTAGCGGAGGAGGTTCATTCTGAGATAACTATGAATCCTAATTCAACGCCGTTTGAGCTCACTAGAGAAGACTTCCCCCTTCTTCAAGGCATTCCCAAGGCTACACTGACACTACAAGCACAAGTGTCTGCTCCATTAGCAAAGGCTTGTTCTGAGACAGACAAGGGTGGTAATTCGATGTTGTCTGAGGTCTCGAGTGAAGATCTCTCACCCCTTCTTCCATGCGTTCCCAAGGATACACCACCAACACAAGGCCAAAGCTATATTCCATTGGAAAAGGCTCATTCTGAGACAGACATGGGTAGCAATTTGGAGTCTTTTGAGCTCTCAAATGAAGATTTCCCCCTTCTTCCAAAGGTTTGTTCCGAGACACACAAGGATGACAAGTCAAGGTCGATTGAGCTCTCAAAGAAAGATTTTCCTCTCCTTCAATCCTCTCAGAAGACTGTCCCGTCAGAGTCTGCAAAGTTAACTGAGCAAACTAAGAGCTTTCCATCCTGTAAATTGAAAAATATGGAGTTTGGAACTCTCAAGTATTCACACTCACTGAGGAGACAAAGTTTTTCAACAAAGAGTAAGAAAGAAGATAGTGGTATTTCGTTATCTCAAAAAGCTGTGATGGTAGTTCCGAAGGTGGCAAGTGAGAGGGAAAAGGAATCTCCTCAAAGC 2217 0.419 MDNKKENLPPSPPSKLLSIDEELWKMAEERVQEILWTIEPNVLSEENRKDVIDYVRRLIGDYYGAHVLPFGSVPLKTYLPDGDIDLTALSHEDPEEDLALTVCSILEREEDPEYQVKDIQHIPAQVQLVKCTVKNIPVDISFNQMVGFYTIYFLEQVDQLVGKNHLFKRSIILIKAWCYYESRILGAHHGLLSTYAIEILVLYIVNRFHSSLRGPLEVLYIFLDYYGSFDWDHNYASIWGPKALSSLPEIVETPECDQGGFLLQKEFLRNYRDMCSFSIRASETATPEFQVKLMNILDPLRNDNNVGRCVNLANLHRIRLALSYGARRLKQALTLPGENMGSALEKFFFCTLERNGKGERADVDIPVSPFGTGRCEGSVLDGDYGGYYFDSQYVQLYPKYAMPVTTVHSGSPSSPSHDDMLALSTQQNWSEGDFLTLQQNWSMFYQSGSNVYIPGQILYHPTYNSIDEGVKSRGTGTYIPDLNYNSYWDIRANVNRPRKIPFAKYNASPKSPPTKQLAEEVHSEITMNPNSTPFELTREDFPLLQGIPKATLTLQAQVSAPLAKACSETDKGGNSMLSEVSSEDLSPLLPCVPKDTPPTQGQSYIPLEKAHSETDMGSNLESFELSNEDFPLLPKVCSETHKDDKSRSIELSKKDFPLLQSSQKTVPSESAKLTEQTKSFPSCKLKNMEFGTLKYSHSLRRQSFSTKSKKEDSGISLSQKAVMVVPKVASEREKESPQS 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01209 739 Gene3D Beta Polymerase, domain 2 40 144 IPR043519 -
Lapu9g01209 739 SUPERFAMILY Nucleotidyltransferase 10 185 IPR043519 -
Lapu9g01209 739 SUPERFAMILY PAP/OAS1 substrate-binding domain 166 334 - -
Lapu9g01209 739 CDD NT_PAP_TUTase 47 154 - -
Lapu9g01209 739 MobiDBLite consensus disorder prediction 701 739 - -
Lapu9g01209 739 PANTHER PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY 11 364 - -
Lapu9g01209 739 Gene3D - 145 341 - -
Lapu9g01209 739 MobiDBLite consensus disorder prediction 568 602 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01209 Lapu-Chr9 25882568 25887393 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01209 - - pvu:PHAVU_009G141900g 1155.2