Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01186 ATGTGGGAGTCCTCTCCTTCAGAGGCCGAAGCAGAGGCACCCATGACACCACCACCTAACAACCTTATACCGTCCCTCCCAGACGACGTCGCTCTGAACTGCATAGCACGCATCCCTCGCAGCCACCACCCAACCCTATCCCTTGTTTCCAAACCCATCCACACCCTCCTCTCTTCCCCTCTCTTCTTCACCACGCGCTCCCTCCTCAACTGCACCCAACCCCTCCTCTACCTCACTCTCCGCACACGCGCCTCCTCCCTTCAGTGGTTCACGCTCCACCGCACACTCCCTAGTCCCCTCCTAGCCCCCCTTCCCCCGATTCCCTCCCCCGCCGTGGGCTCCGCCTACGCCGTCCTCGGCTCCACCATTTACGTCCTTGGCGGCTCCATCAACGACGTCCCTTCCCCTCACGTCTGGCTCCTCGACTGCCGCTTCCACCGCTGGCTCCTAGGCCCAACTATGCGCGTCGCACGCGAGTTCGCCGCCGCCGGAGTCATCGGCGGAAAGATCTACGTCCTCGGCGGCTGCGTCGCCGACACGTGGGCCCGCTCAGCCAACTGGGCGGAGGTCCTGGACCCCGAGGTTGGGCGCTGGGAGAGGGTGGCCAGCCCCTCCGAGGTACGGGAGAAGTGGATGCACGCCAGCGCCGTTGTTGGCGACAGGGTGTACGCGATGGCGGACCGCGGCGGCATCGCTTACGAGCCGCGCACCGGATCGTGGGAGAGCGTAGGGGGAGAATTGGATCTCGGATGGAGAGGGAGGGCGTGCGTAGTGGAGGGTATTTTGTACTGCTACGATTATTTGGGGAAAATCAAAGGATTCGATGTGGGGCGCGGGGTGTGGGAGGAATTGAAGGGGTTGGAGAAGAGTTTGCCTAGGTTTCTGTGTGGGGCGACGATGGCTGATTTGGGTGGGAAATTGTGTGTGGTGTGGGAGTGCCAAGGTAATGGGAAAGAAATGGAGATTTGGTGCGCTGAGATTGGAGTGAAGAAGAATCCAGATGGGGAACTGTTGGGTCAACTTGGTTGGTGTGGGAAGGTTCTCTCTGTTCCCAAAGGCTCCTCTGTGGTGCATTGCTCTTCTGTTGCCTTGTGA 1095 0.6091 MWESSPSEAEAEAPMTPPPNNLIPSLPDDVALNCIARIPRSHHPTLSLVSKPIHTLLSSPLFFTTRSLLNCTQPLLYLTLRTRASSLQWFTLHRTLPSPLLAPLPPIPSPAVGSAYAVLGSTIYVLGGSINDVPSPHVWLLDCRFHRWLLGPTMRVAREFAAAGVIGGKIYVLGGCVADTWARSANWAEVLDPEVGRWERVASPSEVREKWMHASAVVGDRVYAMADRGGIAYEPRTGSWESVGGELDLGWRGRACVVEGILYCYDYLGKIKGFDVGRGVWEELKGLEKSLPRFLCGATMADLGGKLCVVWECQGNGKEMEIWCAEIGVKKNPDGELLGQLGWCGKVLSVPKGSSVVHCSSVAL* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01186 364 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 10 348 - -
Lapu9g01186 364 MobiDBLite consensus disorder prediction 1 22 - -
Lapu9g01186 364 Pfam Kelch motif 158 204 IPR006652 GO:0005515
Lapu9g01186 364 Pfam Kelch motif 111 155 IPR006652 GO:0005515
Lapu9g01186 364 SMART kelc_smart 169 221 IPR006652 GO:0005515
Lapu9g01186 364 SMART kelc_smart 122 168 IPR006652 GO:0005515
Lapu9g01186 364 SUPERFAMILY Kelch motif 99 330 IPR015915 GO:0005515
Lapu9g01186 364 Gene3D - 73 331 IPR015915 GO:0005515
Lapu9g01186 364 CDD F-box_AtAFR-like 22 66 - -
Lapu9g01186 364 SUPERFAMILY F-box domain 18 106 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01186 Lapu-Chr9 25532477 25533571 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01186 26 348 Miscellaneous Gene Families AT4G33900 36.000 1.55e-56 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01186 - - gmx:100798508 630.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01186 9 25532477 25533571 Lapu9g01186 9 25532477 25533571 ECH