Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01065 ATGGAAAAGTGGGTGGTTTTGGTGATGCTCTTGTTGTTATGGAAAACAAGGGAAGGTTTTGGTGTTAAAGCTGAGGTCACATACGATGGAAGATCTCTCATCATTGATGGTGAGAGAAAAATTCTCTTCTCTGGTTCAATTCATTATCCTCGCAGCACTCCTCAGATGTGGCCAGATTTGATAGCGAAAGCAAAGGAAGGAGGAGTGGACGTGATTCAAACCTATGTGTTTTGGAATCTTCACGAGCCCCAACAAGGAAAGTATGATTTCAGTGGGAGATATGATCTGGTGGGATTCATAAAGGAAATTAAAGCTCAAGGGATGTATGTTTGCCTCAGGATTGGACCTTTCATAGAGAGTGAATGGAGATATGGGGGTTTCCCTTTCTGGTTACATGATATTCCTGGTATTGTCTTCCGAACTGATAATGAGCCATTCAAGTTCTACATGCAAAATTTTACCACAAAAATTGTGGACATGATGAAAGCAGAAAGCTTATATGCTTCTCAAGGAGGCCCAATTATATTGTCACAGGTTGAAAATGAATACCAAAACATCCAAAACGCATTTGGCCCAGCAGGATCTCAGTATGTTCTATGGGCTGCAAAAATGGCAGTGGGACTTAACACTGGCGTTCCATGGGTTATGTGCAAACAAACTGATGCTCCTGATCCTATAAACACATGCAACGGCATGAAATGCGGAGAAACTTTCACTGGACCAAATTCCCCCAATAAACCTGCATTGTGGACTGAGAATTGGACATCTTTCTATCAAGTACATGGTGGAATGCCATACATAAGGTCTGCTGAAGATATAGCATTTCATGTCACCCTTTTTGTTGCAAGAAATGGAAGCTATGTCAACTATTATATGTACCATGGAGGAACCAACTTTGGTAGAACAGGCTCTGCTTATGTTATAACAGCCTATTATGATCAAGCCCCACTTGATGAATATGGTTTGCTCGGGCAACCCAAGTGGGGACATCTCAAGCAGTTACATGCAGCAATAAAGTCGTGCTCTACCACCTTACTACAAGGAGTGCGGAGGAACTTCTCTTTAGGTCAACTGCAGGAAGGTTATGTCTTTGAAGAAGAAAAAGGAGAATGTGTTGCATTCCTTATAAACGATGATAGAGAAAATAAGGTCTCTGTGCAATTCCGCAACAGATCATACGAATTGCTCCCCAAGTCAATAAGCATCTTACCAGATTGTCAAAATGTGACTTTCAACACTGCAAATGTAAATACCAGAAGCAACACAAGAATCATAAGTCCTAAACAAAAATTCAGCTCAGCGGATGCTTGGAAGCAATTCCAAGATGTCATTCCAAGCTTTGATGACACCTCACTAAAATCGAATTCATTTCTTGAGCAAATGAATACAACCAAAGACGAATCGGATTACCTTTGGTATACTCATAGGTTTGAATACAATTTATCTTGCAGCAAACCAACACTCAATGTTCAGTCTGCTGCTCATGTTGCTCATGCTTTTGTGAACAAGACATACATAGGAGGGGCACATGGAAATCATGATGTGAAATCATTCACCTTAGAGCTCCCAGTTACATTAAAAGAAGGGACAAACAACCTTTCTATACTTAGCGTTATGGCTGGACTTCCGGATTCAGGGCCATTTCTTGAAAGAAGGTTCGCTGGTTTAAGCAGTGTGCAACTTCAGTGCAGCAAAGAAGAGTCTCTTAATTTGACCAAGTCCTTGTGGGGCTATCAGGCTGGATTACTGGGGGAGAAATTACAAGTATATACAGGACAAAATAGCAGTGATGTTGAATGGAGTCAACTGGGGAATATTAAGGAACAAACGCTCGTCTGGTACAAGACAACATTTGACACACCAAAGGGAGATGACCCTGTTGTCTTGGACCTTGGTTCAATGGGAAAAGGTGAGGCTTGGGTAAATGAACAAAGCATTGGTCGTTATTGGATCTTGTTTCACGATTCCAAAGGCAACCCTTCACAATCACTGTATCATGTGCCTCGGTCTTTCCTTAAGGACTCTGGAAACATTTTGGTTTTACTGGAGGAAGGTGGAGGGAACCCTCTTGGCATCTCCTTGGCCACTGTTTCAGTCACAGATTTACAGCAAAACTTTTCTAAATTACCATTTCCCTCTTCAGCTTAG 2148 0.4157 MEKWVVLVMLLLLWKTREGFGVKAEVTYDGRSLIIDGERKILFSGSIHYPRSTPQMWPDLIAKAKEGGVDVIQTYVFWNLHEPQQGKYDFSGRYDLVGFIKEIKAQGMYVCLRIGPFIESEWRYGGFPFWLHDIPGIVFRTDNEPFKFYMQNFTTKIVDMMKAESLYASQGGPIILSQVENEYQNIQNAFGPAGSQYVLWAAKMAVGLNTGVPWVMCKQTDAPDPINTCNGMKCGETFTGPNSPNKPALWTENWTSFYQVHGGMPYIRSAEDIAFHVTLFVARNGSYVNYYMYHGGTNFGRTGSAYVITAYYDQAPLDEYGLLGQPKWGHLKQLHAAIKSCSTTLLQGVRRNFSLGQLQEGYVFEEEKGECVAFLINDDRENKVSVQFRNRSYELLPKSISILPDCQNVTFNTANVNTRSNTRIISPKQKFSSADAWKQFQDVIPSFDDTSLKSNSFLEQMNTTKDESDYLWYTHRFEYNLSCSKPTLNVQSAAHVAHAFVNKTYIGGAHGNHDVKSFTLELPVTLKEGTNNLSILSVMAGLPDSGPFLERRFAGLSSVQLQCSKEESLNLTKSLWGYQAGLLGEKLQVYTGQNSSDVEWSQLGNIKEQTLVWYKTTFDTPKGDDPVVLDLGSMGKGEAWVNEQSIGRYWILFHDSKGNPSQSLYHVPRSFLKDSGNILVLLEEGGGNPLGISLATVSVTDLQQNFSKLPFPSSA* 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01065 715 Gene3D - 437 572 - -
Lapu9g01065 715 FunFam Beta-galactosidase 578 703 - -
Lapu9g01065 715 PANTHER BETA-GALACTOSIDASE RELATED 13 708 IPR001944 GO:0004553|GO:0005975
Lapu9g01065 715 SUPERFAMILY Galactose-binding domain-like 400 555 IPR008979 -
Lapu9g01065 715 Gene3D Glycosidases 22 342 - -
Lapu9g01065 715 FunFam Beta-galactosidase 291 418 - -
Lapu9g01065 715 Pfam Beta-sandwich domain in beta galactosidase 345 416 IPR041392 -
Lapu9g01065 715 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 171 183 IPR019801 GO:0004553|GO:0005975
Lapu9g01065 715 SUPERFAMILY Galactose-binding domain-like 575 700 IPR008979 -
Lapu9g01065 715 SUPERFAMILY (Trans)glycosidases 25 341 IPR017853 -
Lapu9g01065 715 Pfam Glycosyl hydrolases family 35 32 337 IPR031330 -
Lapu9g01065 715 Gene3D - 575 706 - -
Lapu9g01065 715 FunFam Beta-galactosidase 22 342 - -
Lapu9g01065 715 PRINTS Glycosyl hydrolase family 35 signature 112 131 IPR001944 GO:0004553|GO:0005975
Lapu9g01065 715 PRINTS Glycosyl hydrolase family 35 signature 57 75 IPR001944 GO:0004553|GO:0005975
Lapu9g01065 715 PRINTS Glycosyl hydrolase family 35 signature 636 652 IPR001944 GO:0004553|GO:0005975
Lapu9g01065 715 PRINTS Glycosyl hydrolase family 35 signature 169 184 IPR001944 GO:0004553|GO:0005975
Lapu9g01065 715 PRINTS Glycosyl hydrolase family 35 signature 249 264 IPR001944 GO:0004553|GO:0005975
Lapu9g01065 715 PRINTS Glycosyl hydrolase family 35 signature 305 321 IPR001944 GO:0004553|GO:0005975
Lapu9g01065 715 PRINTS Glycosyl hydrolase family 35 signature 36 53 IPR001944 GO:0004553|GO:0005975
Lapu9g01065 715 PRINTS Glycosyl hydrolase family 35 signature 286 301 IPR001944 GO:0004553|GO:0005975
Lapu9g01065 715 PRINTS Glycosyl hydrolase family 35 signature 609 623 IPR001944 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01065 Lapu-Chr9 19538562 19545884 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01065 26 700 Glycoside Hydrolase AT5G63800 64.159 0.0 945
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01065 - - gmx:100818637 1309.66