Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01004 ATGGCACCGAGCGATCTCCGCCGCCCGTTCAAGCGACGACCTATCTCCGATCAAGAGAAGCGCAGGGCACAGTCTCTGCTCCGCCAGGCACAGAATCGCCTAGATGCCCAGCGCCACGCACGTTTCTTAGCCTCCACCGTCCTCACTCTCCCCTTCCAATCCTACGTACCAGAATCACAACCCCAATCCGAACTCGAACCCGAATTCGAATTCGAACTCGAACTCGAACTCACCGAAGCCGCTTCCGCTTCCGGCTCGAACTCGCTCGAGAACCTCGACGTCCTCGGAGCCTCGAAGCTGAAGGCCGCGGAAGCTCGCAAGTGGTTCGCGAAGCAGCTCATGCTTCCTGAGTGGATGATCGACGTCCCCAACAACCTCACCCAAGACTGGTTCGTCTTCGCTCGCCCTTCCGGGAAACGGTGTTTCGTCGTTTCGTGTAACGGAACGACAATTAGCCGTCTGCGTAATGGTTCCATTCTGCATCGGTTTCCCTCCGCGTTGCCGAGCGGCGCCAGGAAAAAGGATTCCGGTTCTTCTCAGTCTTACTCTATATTGGATTGCATCTTTCACGAGCTGGATCAGACCTATTACGTTATTGACATGGTTTGTTGGAGGGGTTACTCTCTGTCCGATTGCACTGCGGAGTTTAGGTTCTTCTGGTTGAATTCCAAGCTTGCAGAGTCCGGTGCCTGTGAACCTCCTTCTTATTATCACAAGTATAGGTTCAGTTTGGTTCCGGTGTATGGTTGTGACTCGAATGGTCTTCAAGCTGCTTATTCGGCACCGGTGCCTTATGTCAAAGATGGTCTTCTCTTTTATAACAAGCATGCTCACTATCAGGCAGGAATTACGCCATTAGCATTAGTTTGGAAGGATGAGAACTGTAGTCAATATGTTATGGACACAGACAGTAAAGGACAGGTTCCGAACCAACAGCAGGTGGTTTTGGAGCTTCAAGATGGAAAATTGACCTCTTCGGATGATCCTCCTGTCGTATTTGGCTGTTTAGATGGAACCTTTATACAACAGTCAGGGCTGCATTCAGGAGAACTTATACGGTTTTCAATTGGGGAGGGAGGATTGCTTTTGATGGATGGGAAGCTTGAGAAAGCTGATCTACATTATCTTGGCAAGGCCAACCGAGCTCGTGGTTCGGCTGATAGTTTCTCTAAGGTTATGTTCCAATACAGTATTCGGCACTCCCCCTTAAAAATTGATGTTTTGTTGGAATCTGTCTGCTCACCAGTTGATCAAGAAAGCAAAGCCTGTGATGTTGAGATGGATGGTTGA 1290 0.4992 MAPSDLRRPFKRRPISDQEKRRAQSLLRQAQNRLDAQRHARFLASTVLTLPFQSYVPESQPQSELEPEFEFELELELTEAASASGSNSLENLDVLGASKLKAAEARKWFAKQLMLPEWMIDVPNNLTQDWFVFARPSGKRCFVVSCNGTTISRLRNGSILHRFPSALPSGARKKDSGSSQSYSILDCIFHELDQTYYVIDMVCWRGYSLSDCTAEFRFFWLNSKLAESGACEPPSYYHKYRFSLVPVYGCDSNGLQAAYSAPVPYVKDGLLFYNKHAHYQAGITPLALVWKDENCSQYVMDTDSKGQVPNQQQVVLELQDGKLTSSDDPPVVFGCLDGTFIQQSGLHSGELIRFSIGEGGLLLMDGKLEKADLHYLGKANRARGSADSFSKVMFQYSIRHSPLKIDVLLESVCSPVDQESKACDVEMDG* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01004 429 CDD Snurportin-1_C 108 293 - -
Lapu9g01004 429 PANTHER SNURPORTIN1 RNUT1 PROTEIN RNA, U TRANSPORTER 1 1 428 IPR017336 GO:0005634|GO:0005737|GO:0061015
Lapu9g01004 429 MobiDBLite consensus disorder prediction 1 23 - -
Lapu9g01004 429 Gene3D DNA ligase/mRNA capping enzyme 3 318 - -
Lapu9g01004 429 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 108 291 - -
Lapu9g01004 429 Coils Coil 20 40 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01004 K13151 - gmx:100801927 687.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01004 9 16096638 16106906 Lapu9g01004 9 16096638 16106906 ECH