Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00975 ATGGCGGCAATCAGCAACATTCATTTACAATTTCCACGGAATTTAAACGATTCAAAGAAGAAGGATGTGAGTTTTTATGCTCCATGCAACATTACTAACATGTTTAATAATAAACGAAGGTTTTTTTCGGTGACTGCAAGTTATAGTGATAGTCCTCGAAAAATGGACACGACCAACAAAGTAAATGTGAATGGAATACACGTTGCTGAGGCTCCTCTACAAGGAGGAAAGTTTGCAAAAGAAAGTGCAGCAGATGAAGCCACTGTTACTAGCTTACGTGGAAGGTTTGTGGAGGATAAGTTTGTATTTAGGCAAATTTTTGTTATCAGGTCTTATGAAATTGGACCAGATAAAACTGCCACCATGGAGACACTCATGAATTTTCTTCAGGAAACTGCTTTAAATCATGTGACTAGCTCTGGGATTGGGGGAGAAGGATTTGGAGCAACCCGCGAGATGAGCCTTCGAAAACTCATTTGGGTTGTTACTCGTATTCAACTTCAAGTTCAGAAATATAACAAATGGGGAGACGAAATTGAAGTTGATACTTGGGTGGATGCAGCAGGAAAGAATGGAATGCGAAGAGATTGGATAATCAGAGATCACTACACCAAAGAGATCATAACAAGAGCCACAAGCACATGGGTGATCATGAATAGACAAACAAGAAGACTTTCCAAGATCCCTGAAGAGGTCAAACAAGAGCTTGCTCCTTTTTACCTAAATAGGCTTGCCGTTCCAGCTGAAGAAGTAGATTGTGAGAGGATAGACAAACTCACTGATGACACAGCTGAGAGAATCCGATCTGGTTTGGCTCCAAGGTGGAATGACATGGACGCTAACCAGCATGTTAATAATGTGAAATACATTGGATGGATTTTGGAGAGTGTGCCAATTGAAGTTCTAGAACATTATAATATGACAAGCATGACTTTGGAGTATCGACGTGAATGTACACAATCAAATATTGTTGAATCCATGACGTGTCCAACAGCAAGAGTTTTTGAATCTAATAATAATTCCAGGAACAGAAAATCAGACCTGCAATACACACACTTGCTTCGTCTGCAACAAGATAAAGCAGACGTTGTTCGAGCCAGAACTGAGTGGAATTTCAAGCAAAACCAATAG 1131 0.3996 MAAISNIHLQFPRNLNDSKKKDVSFYAPCNITNMFNNKRRFFSVTASYSDSPRKMDTTNKVNVNGIHVAEAPLQGGKFAKESAADEATVTSLRGRFVEDKFVFRQIFVIRSYEIGPDKTATMETLMNFLQETALNHVTSSGIGGEGFGATREMSLRKLIWVVTRIQLQVQKYNKWGDEIEVDTWVDAAGKNGMRRDWIIRDHYTKEIITRATSTWVIMNRQTRRLSKIPEEVKQELAPFYLNRLAVPAEEVDCERIDKLTDDTAERIRSGLAPRWNDMDANQHVNNVKYIGWILESVPIEVLEHYNMTSMTLEYRRECTQSNIVESMTCPTARVFESNNNSRNRKSDLQYTHLLRLQQDKADVVRARTEWNFKQNQ* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00975 376 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 258 370 IPR029069 -
Lapu9g00975 376 Pfam Acyl-ACP thioesterase 102 371 IPR002864 GO:0006633|GO:0016790
Lapu9g00975 376 FunFam Acyl-[acyl-carrier-protein] hydrolase 94 376 - -
Lapu9g00975 376 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 97 244 IPR029069 -
Lapu9g00975 376 Gene3D Hotdog Thioesterase 94 375 - -
Lapu9g00975 376 CDD 4HBT 103 219 - -
Lapu9g00975 376 PANTHER OLEOYL-ACYL CARRIER PROTEIN THIOESTERASE 1, CHLOROPLASTIC 79 374 IPR045023 GO:0006633|GO:0016297
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00975 Lapu-Chr9 15234407 15236293 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00975 94 373 Acyl Lipid Metabolism Gene Families AT1G08510 56.786 7.14e-113 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00975 K10781 - gmx:100814191 664.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g00975 9 15234407 15236293 Lapu9g00975 9 15234407 15236293 ECH