Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00918 ATGGAGAACACTACTGGGTTGTGGGTGCTATGGGTTATACTCTTGTTGGGGTGTCTTTTTTCGTCGGAATCTAAGTATATAAGGTATAACACAACGTCAACCATTGTCCCTGGCAAGCTCAACGTTCACTTGGTCGCTCACTCTCACGACGATGTTGGCTGGTTGAAGACCATTGACCAGTATTATGTTGGTTCCAACAACTCAATTCAGGGAGCATGCGTTCAAAACGTGCTTGATTCCCTGGTACCCGCATTGTTGGCTGACAAGAATCGCAAGTTCATTTATGTTGAACAGGCATTTTTTCAGCGATGGTGGAGCGAACAAAGTGATGATACTCAGAACATAGTCAAGGGGCTTGTCAAATCTGGTCAATTGGAGTTCATAAATGGAGGTTTTTGTATGCATGATGAGGCTGCTACTCATTACATTGACATGATTGATCAGACAACTCTTGGACATCAATTTCTCAAAGAAGAATTTGGAGTGACTCCGAGAATAGGGTGGCAGATTGATCCATTTGGACATTCTGCTGTGCAGGCCTACTTGTTGGGGGCAGAGGTTGGATTTGACTCTCTATTCTTTGCACGGATTGACTATCAAGACAGAGCCAAGAGAAAAGATGAAAAAACTCTTGAAGTTGTGTGGCGGGGCTCTAAGAGCTTTGGTTCATCATCACAGATATTTTCTGGTGCGTTCCCTGAGAATTATGAACCTCCGACTAAATTCTACTATGAAGTAAATGACGATTCTCCCATTGTTCAGGATGATGTAAATTTATTTGATTACAATGTCCCTGAAAGAGTAAACGAGTTTGTCGCAGCTGCAATATCACAGGCCAATATTACGCGCACAAATCATATAATGTGGACAATGGGGACAGATTTCAAGTACCAATATGCGCAGAGCTGGTTTCGGCAAATGGATAAGTTTATTCACTACGTTAATCAAGACGGTCGGGTCCATGCCTTATACTCAACCCCATCAATATACACTGATGCTAAACATGCTGCAAATGAGGCCTGGCCAATCAAGACTGATGACTACTTTCCGTATGCAGATCGTCTAAATGCATATTGGACAGGGTATTTTACAAGCAGGCCAGCTCTCAAAGGTTATGTCAGACTGATAAGTGGATACTACTTGGCAGCAAGGCAGTTGGAGTATTTCAAAGGCAAGAGTGCCTTAGGTCCAAAAACTGACTCTTTGGCTGAAGCTTTGGCTATTGCTCAACATCATGATGCAGTATCTGGTACAGAAAAGCAGCATGTTGCTGATGATTATGCTAAACGACTTTCAATAGGTTATACAGAGGCTGAGAAAGTTGTTGCAGAATCACTTGCTTGTTTGACCGAAGGAGCAACCAAAGCGGGATGCAAGAACCCACAAATTAAATTTCAACAGTGTCCACTTTTGAACATAAGTTACTGTCCTGCATCAGAAGTCGACTTCTCCCATGGGAAAAACCTGGTGGTTGTTGTTTACAATCCTCTGGGATGGAAAAGAGAGGATATCATAAGGATTCCCGTTGTCAGTGAAAACGTTGGTGTTCGGGATTCCAGTGGGAAAAAAATCCAAGCCCAGCTGGTTCCAATACCTGATTTTTTTCTTGGTTTAAGAAACTACCACACTGTGGCCTACTTGGAAGTGTCTCCAACTGTGAAACCCAAATACTGGCTTGCTTTTTCAGCTGTTGTTCCCCCACTTGGTTTTAGCACTTACTATGTATCCTATGCAAAAAATGAAGCCACTATTTCAGATAGAGATGCAGCTTACAAGTCAGAGAATGGGAGTGATACAATTACAGTGGGTCTGGAAAACTTGAAATTAACTTATTCTGTGAAGGAAGGGAAACTTATTCAATATGTCAACAGCAAAAGCAAGGTTGAAGAATCTCTAGAGCAGGCATATAAATTTTACACCGGCAAAAGATACGATGAGACTGGTCAGGCATCTGGAGCATATATTTTTAGACCCGATGGTTCACCCTCTCCCATCAATGCCAAGGGCAAGTCTCCTCTCACAGTTTTCCGAGGACCAATTGTACATGAAGTGCAGCAGCAGATCGATTCATGGATATACCAGACTACTAGACTGTACAAGGGTAAAGAACATGCTGAAGTTGAGTTTATTGTTGGACCTATACCCAATGCTGATGGAGTAGGCAAAGAAATTGCAACTGAGATTAAAACAAATTTGGCAAGCAACAAAACATTCTATACTGATTCCAATGGACGTGATTTCATTGAACGTGTTCGAGACTATAGAAAAGACTGGAACTTGGAAGTGAATCAACCTGTTGCTGGAAATTATTACCCTATCAACCTTGGGATTTACCTGAAAGATAAAACCAAAGAGTTTTCTATTTTGGTAGATAGAGCTGTGGGGGGCTCCAGCATCATAGATGGACAATTGGAACTAATGGTTCATAGGAGGTTGCTTGAGGATGATTCCAGAGGTGTTGCAGAGGCACTGAATGAAGAAGTTTGCATCAATTATAAGTGCACAGGATTAACTGTGGTAGGGAAATACTATTTCAGAATTGATCCTGTAGGAGAGGGTGCTAGATGGCGTCGATCATTTGGTCAGGAGATATACTCACCCTTGCTTTTAGCCTTCACAGAGAGTGATGCTCACTGGGGAGATTCTCATGTCACAACCTTCTCGGGAATAGATTCCTCGTACAACTTACCTGATAACGTTGCAATAATAACCCTCCAGGATCTGGGTGATGAAAATGTTCTCCTTCGACTGGCACACTTATACGAGATTGACGAGGACAAATATCTTTCAGTTAAGGCAACTGTAGAACTGAAAAAGGTGTTTGCGCACAAACAGATAAACAAAATAACTGAAGTGAGTTTATCAGCTAACCAAGAAAGATCAGAAATGGAGAGGAAGAGATTGGTTTGGCAAGTTAAAGGGTCACCTCCAGAACCTAAGGTGTTGAGGGGAGGACCAGTAGATCCAGAAAATCTAACTGTAGAACTCGCTCCCATGGAAATTCGGACTTTTGTTATCAGTTTTAGGCCTTAA 3033 0.4207 MENTTGLWVLWVILLLGCLFSSESKYIRYNTTSTIVPGKLNVHLVAHSHDDVGWLKTIDQYYVGSNNSIQGACVQNVLDSLVPALLADKNRKFIYVEQAFFQRWWSEQSDDTQNIVKGLVKSGQLEFINGGFCMHDEAATHYIDMIDQTTLGHQFLKEEFGVTPRIGWQIDPFGHSAVQAYLLGAEVGFDSLFFARIDYQDRAKRKDEKTLEVVWRGSKSFGSSSQIFSGAFPENYEPPTKFYYEVNDDSPIVQDDVNLFDYNVPERVNEFVAAAISQANITRTNHIMWTMGTDFKYQYAQSWFRQMDKFIHYVNQDGRVHALYSTPSIYTDAKHAANEAWPIKTDDYFPYADRLNAYWTGYFTSRPALKGYVRLISGYYLAARQLEYFKGKSALGPKTDSLAEALAIAQHHDAVSGTEKQHVADDYAKRLSIGYTEAEKVVAESLACLTEGATKAGCKNPQIKFQQCPLLNISYCPASEVDFSHGKNLVVVVYNPLGWKREDIIRIPVVSENVGVRDSSGKKIQAQLVPIPDFFLGLRNYHTVAYLEVSPTVKPKYWLAFSAVVPPLGFSTYYVSYAKNEATISDRDAAYKSENGSDTITVGLENLKLTYSVKEGKLIQYVNSKSKVEESLEQAYKFYTGKRYDETGQASGAYIFRPDGSPSPINAKGKSPLTVFRGPIVHEVQQQIDSWIYQTTRLYKGKEHAEVEFIVGPIPNADGVGKEIATEIKTNLASNKTFYTDSNGRDFIERVRDYRKDWNLEVNQPVAGNYYPINLGIYLKDKTKEFSILVDRAVGGSSIIDGQLELMVHRRLLEDDSRGVAEALNEEVCINYKCTGLTVVGKYYFRIDPVGEGARWRRSFGQEIYSPLLLAFTESDAHWGDSHVTTFSGIDSSYNLPDNVAIITLQDLGDENVLLRLAHLYEIDEDKYLSVKATVELKKVFAHKQINKITEVSLSANQERSEMERKRLVWQVKGSPPEPKVLRGGPVDPENLTVELAPMEIRTFVISFRP* 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00918 1010 FunFam Alpha-mannosidase 319 398 - -
Lapu9g00918 1010 FunFam Alpha-mannosidase 399 455 - -
Lapu9g00918 1010 Pfam Alpha mannosidase middle domain 357 449 IPR015341 GO:0004559|GO:0006013
Lapu9g00918 1010 FunFam Alpha-mannosidase 40 320 - -
Lapu9g00918 1010 Gene3D - 600 866 - -
Lapu9g00918 1010 Gene3D - 477 599 IPR013780 -
Lapu9g00918 1010 FunFam Alpha-mannosidase 885 1010 - -
Lapu9g00918 1010 Gene3D - 884 1009 - -
Lapu9g00918 1010 PANTHER ALPHA-MANNOSIDASE 12 1008 - -
Lapu9g00918 1010 Pfam Glycosyl hydrolases family 38 N-terminal domain 41 352 IPR000602 GO:0004559|GO:0006013
Lapu9g00918 1010 SUPERFAMILY Glycoside hydrolase/deacetylase 29 353 IPR011330 GO:0005975
Lapu9g00918 1010 Pfam Glycosyl hydrolases family 38 C-terminal domain 605 818 IPR011682 GO:0004559|GO:0006013
Lapu9g00918 1010 SUPERFAMILY Families 57/38 glycoside transferase middle domain 356 450 IPR028995 -
Lapu9g00918 1010 FunFam Alpha-mannosidase 601 866 - -
Lapu9g00918 1010 Pfam Glycosyl hydrolases family 38 C-terminal beta sandwich domain 899 1004 IPR041147 -
Lapu9g00918 1010 Gene3D Glycoside hydrolase family 38, central domain 321 399 IPR037094 GO:0004559|GO:0006013
Lapu9g00918 1010 SMART Alpha_mann_mid_2 357 431 IPR015341 GO:0004559|GO:0006013
Lapu9g00918 1010 CDD GH38N_AMII_LAM_like 40 316 - -
Lapu9g00918 1010 FunFam Alpha-mannosidase 477 601 - -
Lapu9g00918 1010 Gene3D Glycoside hydrolase 38, N terminal domain 40 320 IPR027291 -
Lapu9g00918 1010 Gene3D Glycoside hydrolase family 38, central domain 400 455 IPR037094 GO:0004559|GO:0006013
Lapu9g00918 1010 SUPERFAMILY Galactose mutarotase-like 462 1008 IPR011013 GO:0003824|GO:0005975|GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00918 Lapu-Chr9 13842337 13850940 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00918 8 922 Glycoside Hydrolase AT5G13980 69.447 0.0 1325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00918 K01191 - gmx:100798150 1854.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g00918 9 13842337 13850940 Lapu9g00918 9 13842337 13850940 ECH