Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00871 ATGCTGAACGACGTCGTCGGGAACGGCATCTCCGGCATCCTCCACAAGTGGGTGAACTACGGCCGCGGGTGGCGCCCCCGCTGGTTCGTCCTCCACGACGGCGTGCTCTCCTACTACAAGATCCACGGTCCCGACAAGCTCGTCCTCAACCGCGACGTCGAGACCGGCTCCATGGTCATTGGCGAGGAGTCCCTCCGCCGCATCAACAGCCACCGCCACAGCCCCTCCCGCAACCGCAAACCCGTCAGCGAAATCCATCTTATGGTGTGTTCGGTGCGAGAGAACAGGTCAGATAAGAGGAGGTTTTCTGTGTGTACGGGGACGAAGAAGAGGCTGCATTTGAGGGCGGAGAGTAAGGAAGATAGAGCAACGTGGGTGGATGCAATGATGGCAGTGAAGGACATGTATCCTCGCGTGCCCAATTCAGAGGTTATGTCACCCGTGGCATCAGTGGCTATTTCCACTGATAAGTTGAGAGAGAGGCTTTTAGAAGAGGGTGTGAGTGAAGCTACTATTGGGGAATGTGAGGAAATCATGAAATCCGAGTTCTCTCAGTTGAAGAAGCAAATGGTGGCTCTCAAGCACAAGCATTTTCTACTAATGGACACCTTACGCCAGTTAGAGTCAGAGAAAGTTGATCTGGAGAACACACTTGTCGAAGACCAAAGACAATCAAGGGATGGAGCAGATACGTATCCATCACCGCAGGAAAAATATAGCGAGGGAAGTGGGGATGATTCGTCTGATGAGAACGATAGGCTCGATCCGTCAGACGATGACGACGATGCATTCTTCGATACATGTGAAATTCTATCAACAGGCTCTGATCCCATAAGACCCAGCCATGATTCTGAGCAGGATGAGACTGGTCCAAATGGTATATGCGACGAAAAGTCACCCATTGGATCTAACTATCCTCATATCAAGAGACGAAAGAAGTTGCCGGATCCTATTGAGAAAGAAAGTAGCGTCAGTCTATGGTCAATCATAAAAGATAATATCGGGAAGGATCTTACAAAAGTTTGTCTTCCAGTTTACTTTAACGAGCCTCTCTCCTCACTGCAGAAATGTTTTGAAGATGTTGAGTACTCTTACCTTCTAGACCAAGCATATGAATTGGGTAAAATGGGTGATGGTGTGAAGAGGATGGTACATGTAGCTGCATTTGCAGCTTCTGCATATGCTAGCACCAATGGTAGAAGTTGCAAACCATTTAATCCACTGTTGGGAGAGACATATGAAGCAGATTATCCAGACAAAGGAATTCGCTTTATCTCTGAGAAGGTCAGTCATCATCCCATGATTATAGCGTGCCATTGTGAGGGCAGGGGCTGGAAATTTTGGGGTGACGTGAACTTAAAAAGTAAATTTTGGGGTCGTTCAATCCAAGTTGATCCTATTGGTATATTGACAGTAGAATTTGATGATGGAGAAGTCATTCGTTGGAGCAAGGTAACAACATCCATTTACAACCTCATTTTAGGAAAACTCTACTGCGACCATTACGGTACAATGCGCCTAGAGGGGAACCGTGACTACTTATGTAAGATCAAATTCAAGGAGCAGTCAATCATTGATAGGAACCCTCACCAGATTCAAGGCATAGTGGAAGATAAGAAAGGTAGAACAGTGGCAACTCTAATTGGGAAGTGGGATGAGAGTTTGCATTACGTAATCGGAGGGAGTTTTGGGAAAGGAAAAGGGTCCAATGAATCATCAAAACCACATCTTCTGTGGAAGAGGAGCCCGACACCGGAGCACCGGACAAAATATAACTTCACACAATTTGCTATTACACTCAATGAAATCACACCTGGACTAAAGGAGAAGTTGCCACCGACAGATTCAAGGTTAAGACCTGATCAAAGGTGTTTGGAGAATGGACAACATGAAATGGCCAATTCTGAAAAGTTGCGGCTGGAACAAAGACAGCGGCAGGCACGGAAAATGCAAGAAAAGGGTTGGAAACCAATGTGGTTTGCTAAGGAAAAAGGCAGCAACTCTTACCGTTATGTTGGAGGGTACTGGGAGAGTAGGGAAAAGGGGAACTGGGAATCCTGTCCTGACATTTTTGGTCAAGTCTCAACCGATACTGACGTTAACCCAACTCCATAA 2115 0.4671 MLNDVVGNGISGILHKWVNYGRGWRPRWFVLHDGVLSYYKIHGPDKLVLNRDVETGSMVIGEESLRRINSHRHSPSRNRKPVSEIHLMVCSVRENRSDKRRFSVCTGTKKRLHLRAESKEDRATWVDAMMAVKDMYPRVPNSEVMSPVASVAISTDKLRERLLEEGVSEATIGECEEIMKSEFSQLKKQMVALKHKHFLLMDTLRQLESEKVDLENTLVEDQRQSRDGADTYPSPQEKYSEGSGDDSSDENDRLDPSDDDDDAFFDTCEILSTGSDPIRPSHDSEQDETGPNGICDEKSPIGSNYPHIKRRKKLPDPIEKESSVSLWSIIKDNIGKDLTKVCLPVYFNEPLSSLQKCFEDVEYSYLLDQAYELGKMGDGVKRMVHVAAFAASAYASTNGRSCKPFNPLLGETYEADYPDKGIRFISEKVSHHPMIIACHCEGRGWKFWGDVNLKSKFWGRSIQVDPIGILTVEFDDGEVIRWSKVTTSIYNLILGKLYCDHYGTMRLEGNRDYLCKIKFKEQSIIDRNPHQIQGIVEDKKGRTVATLIGKWDESLHYVIGGSFGKGKGSNESSKPHLLWKRSPTPEHRTKYNFTQFAITLNEITPGLKEKLPPTDSRLRPDQRCLENGQHEMANSEKLRLEQRQRQARKMQEKGWKPMWFAKEKGSNSYRYVGGYWESREKGNWESCPDIFGQVSTDTDVNPTP* 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00871 704 SUPERFAMILY Oxysterol-binding protein-like 320 693 IPR037239 -
Lapu9g00871 704 FunFam Oxysterol-binding protein-related protein 2A 622 693 - -
Lapu9g00871 704 Coils Coil 633 653 - -
Lapu9g00871 704 Pfam PH domain 10 130 IPR001849 -
Lapu9g00871 704 Gene3D - 411 591 - -
Lapu9g00871 704 MobiDBLite consensus disorder prediction 215 260 - -
Lapu9g00871 704 Gene3D - 622 694 - -
Lapu9g00871 704 SUPERFAMILY PH domain-like 11 143 - -
Lapu9g00871 704 FunFam oxysterol-binding protein-related protein 1D isoform X1 411 583 - -
Lapu9g00871 704 Coils Coil 204 224 - -
Lapu9g00871 704 Pfam Oxysterol-binding protein 325 680 IPR000648 GO:0008289
Lapu9g00871 704 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 9 679 IPR000648 GO:0008289
Lapu9g00871 704 ProSiteProfiles PH domain profile. 7 134 IPR001849 -
Lapu9g00871 704 Gene3D - 8 136 IPR011993 -
Lapu9g00871 704 SMART PH_update 8 136 IPR001849 -
Lapu9g00871 704 MobiDBLite consensus disorder prediction 272 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00871 Lapu-Chr9 13066155 13073322 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00871 K20456 - gmx:100807703 1196.03