Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00860 ATGAGGAAGTTCGGCACCATCTTCTCCCTTTTCAAATCTAAGAAGAACTTCTCCCTTTCGCTTCATCGAAATTTTCCACTATGTGCCTATCAACTCCACCCGAATTTCAGGAACCTCACGCAGAATTGCGATTTATTACTCTTCTCTCTCTCTTCGCATCGATTTGCCTCCACAACAGCGGAGAATCATTCTGCATTGAATAGGAATCCTCTTCAGGATCAGGACATTGATTTTCCTGGAGGAACAGTAGAATTCATTCCTGAAATGAAGTTTATATCACAATCAGTCAAAGAGAGAATACCTTGCTATCGTGTTCTTGATGATAATGGACAGCCGATCATGGGTCATAATTTTATTCAGGTCAGCAAGGAAGATGCTGTTAAGATGTACACTGACATGGTTACTCTCCGATCTATGGATACTATCTTCTATGAAGCACAAAGACAAGGTCGAATATCGTTTTATGTGACGACAATTGGAGAGGAGGCTATTAATGTTGCTTCAGCTGCAGCCCTTGCCATGGACGATGTTGTTTTTCCTCAGTATAGGGAAGCGGGAGTCTTGTTATGGCGTGGTTTTACTCTGCAAGAATTCGCCAACCAGTTATTTTCCAATAAATATGATAATGGGAAAGGAAGGCAGATGCCAGCTCATTATGGGTCCAACAAGCACAATTACTTTACAATAGCATCAACTATTGCTACACAAATTTCCCATGCTGTTGGAGCTGCCTATTCCTTAAAGATGGATAAAAAGGATGCATGTGCTGTAACTTACTTTGGTGATGGTGGATCTAGTGAAGGAGATTTCCATGCTGCTTTAAATTTTGCAGCAGTTATGGAGGCCCCGGTTATTTTTATATGCCGAAACAATGGATGGGCTATCAGTACCCCCATTTCAGATCAGTTTCGAAGTGATGGTGTAGTCGTGAAAGGACAAGCATATGGAGTCCGTAGCATCCGCGTAGATGGCAATGATGCCCTGGCCATCTATAGTGCTGTCCAAACTGCTCGTGAAATGGCAATTACTGAAGAGAGACCAATTCTAATAGAAGCTCTTACGTACAGAGTGGGACACCATAGCACATCAGATGACTCCACCAAATATCGTCCAGCAAATGAGATTGAATGGTGGAGAGTGGCACGTGATCCTGTGGCTAGATTTAGAAAGTGGATAGAAAATAATGGTTGGTGGAATGATACGGCTGAGTCAGAGCTTATAAACAATTTGAGACGGCGGGTGAGATAA 1248 0.4247 MRKFGTIFSLFKSKKNFSLSLHRNFPLCAYQLHPNFRNLTQNCDLLLFSLSSHRFASTTAENHSALNRNPLQDQDIDFPGGTVEFIPEMKFISQSVKERIPCYRVLDDNGQPIMGHNFIQVSKEDAVKMYTDMVTLRSMDTIFYEAQRQGRISFYVTTIGEEAINVASAAALAMDDVVFPQYREAGVLLWRGFTLQEFANQLFSNKYDNGKGRQMPAHYGSNKHNYFTIASTIATQISHAVGAAYSLKMDKKDACAVTYFGDGGSSEGDFHAALNFAAVMEAPVIFICRNNGWAISTPISDQFRSDGVVVKGQAYGVRSIRVDGNDALAIYSAVQTAREMAITEERPILIEALTYRVGHHSTSDDSTKYRPANEIEWWRVARDPVARFRKWIENNGWWNDTAESELINNLRRRVR* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00860 415 PANTHER 2-OXOISOVALERATE DEHYDROGENASE SUBUNIT ALPHA, MITOCHONDRIAL 71 414 - -
Lapu9g00860 415 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 100 414 IPR029061 -
Lapu9g00860 415 FunFam 2-oxoisovalerate dehydrogenase subunit alpha 71 415 - -
Lapu9g00860 415 Pfam Dehydrogenase E1 component 132 414 IPR001017 GO:0016624
Lapu9g00860 415 CDD TPP_E1_PDC_ADC_BCADC 129 415 - -
Lapu9g00860 415 Gene3D - 71 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00860 Lapu-Chr9 12846034 12856680 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00860 74 306 Acyl Lipid Metabolism Gene Families AT5G09300 78.970 5.16e-138 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00860 K00166 - gmx:100779198 701.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g00860 9 12846034 12856680 Lapu9g00860 9 12846034 12856680 ECH