LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lapu9g00852	ATGGCTTTGGGGAAATATACTAGAGTAGATGGGAGAAGATCGTCGAGTTGGTGTTCTACGGTGACTGTTGTCGTGTTTGTGGCTCTGTGCTTGGTTGGGGTTTGGATGATGACATCATCTTCAGTTGTCCCAGTGCATAATGGAGACGAGGCTCAGGAGACTAAGAATGAAGTGAAAGAACAAACGGATATTAAAGGAGAAGCTGCCGTGGAGATCAGCAATACCAATGCTAGGCAGTTTGAAGATAATCCAGGTGATTTGCCTGAGGATGCAACGAAAGGAGATAGCAATGTATCTGCTGAAGACAATCCTAACTTGTCAGAAAAACAAGATGAGAAGTTGGAGGAAAATCCTGTAGAGAGGTCTTCTGAAGATATAAAGACGGAAGACAAGTCTTCTGAAGACACAACTACGGAAAACGAGGATAAGAAAACAGAGGATGGAGGTTCCAATGCAGAAAATGAATCAAACTCGGACTCTGCCGAAAATAACAAAGAAAGTGACGAGACTTCCACTAAGGATTCTGATTCTGATGAGAGTGAAAAGAAATTTGAATCAGATGATAACAAGAAGTCTGATGCAGATGAGAGTGAGAAGCAATCTGATAACTCTGATGAGACAACAGATAATAGGATAGAGGAGAAGGTGGAAGAAAGTGATAACAAAGAATCTGATGAAAACTCTAGTGAGAAGAATGCAAATGATAATACTAAACAGCAGAGTTCAAATGAGGTATACCCTTCTGGGGCTCAGTCAGAGCTTCAGGATGAAAGTACAACAGAAACTGGGTCTTGGTCAACTCAGGCAGCAGAGTCTAAGAATGAAAAGGAGTCTCAAGAATCCTCCAAGCCAACTGGATACAATTGGAAGCTTTGCAATGTCTCTGCTGGTCCTGATTTTATCCCATGCCTTGACAACTGGAAAGCTATTAGGAGTCTCCGAAGTACTAAGCACTATGAACATCGAGAAAGGCACTGTCCTGAAGAACCTCCTACCTGCGTTGTTCCTGTTCCTAAAGGGTATAAACGCTCAATTGAGTGGCCTAGAAGCAGAGAAAAGATATGGTATCACAATGTTCCACACACCAAGCTTGCTGAAGTTAAGGGCCATCAGAATTGGGTGAAAGTTACGGGAGAGTACCTTGCTTTTCCTGGTGGTGGAACCCAATTTAAACATGGGGCACTTCATTACATTGACTTTATACAAGAGACTGTACCTGACATTGCTTGGGGCAAACGCACACGTGTTATACTAGATGTTGGATGTGGTGTTGCCAGCTTCGGAGGTTTTCTCTTTGAAAGAGATGTACTGGCAATGTCATTAGCTCCCAAGGATGAACATGAAGCTCAGGTACAATTCGCACTTGAAAGGGGGATTCCTGCTATATCTGCTGTGATGGGCACAAAGAGGCTTCCCTTCCCTGGGAAAGTATTTGATGTAGTCCATTGTGCACGATGTAGAGTTCCGTGGCATATAGAAGGTGGTAAACTTCTTTTGGAGCTGAATAGAGTATTGCGGCCTGGTGGTTTTTTTGTATGGTCTGCTACCCCTATCTATCAGAAGCTCCCTGAAGATGTTGAAATATGGAATTCCATGAAGGCACTTACAAAAGCAATATGCTGGGAACTTGTTTCAATCAGCAAGGATCAAGTAAATGGAGTTGGTGTAGCCGTATACAAGAAACCAAGTTCTAATGAGTGTTACGAGCAACGTTCAAAGAATGAGCCTCCGCTGTGTCAAGACTCTGATGATCCTAACGCAGCATGGAACATTAAATTGCAAGCTTGCATACACAAAGCGCCAGTTAGTTCAACGGAACGAGGGTCAAAATTGCCAGAGAAGTGGCCAGCCAGACTGACCAAAGTTCCTTATTGGTTGTCGAGTTCCCAAGTTGGAGTTTATGGAAAGCCAGCCCCTGAAGATTTCACTGCTGATTATGAACACTGGAAACGCGTTGTGTCCAAGTCTTATCTAAATGGCTTGGGAATTCAATGGTCCAATGTCCGCAATGTCATGGATATGAGATCTGTCTATGGAGGATTTGCTGCAGCTTTGAGAGATTTGAATGTTTGGGTCATGAATGTGGTTTCAATAGACTCCCCAGATACCCTTCCCATTATTTATGAACGAGGTCTTTTCGGTATATATCATGATTGGTGTGAATCATTTAGCACCTATCCTAGAACCTATGATCTCCTCCATGCCGATCATCTGTTTTCAAGGCTTAAGAACAGGTGCAATTTGGCTGCGGTAGTGGCTGAGGCTGATCGGATTCTTAGGCCAGAAGGAAAACTTATTGTTCGTGACACTGTTGAGATCATTGAAGAGCTAGAGAGCATGGTAAGGTCTTTGCAGTGGAAGGTTCGCATGACTTACTCCAAGGATAAGGAGGGGTTGTTATGTGTGCAGAAGTCCATGTGGCGACCTAAGGAACAGGAGAAGCTGGAGTATGCTATTATTTAA	2463	0.4336	MALGKYTRVDGRRSSSWCSTVTVVVFVALCLVGVWMMTSSSVVPVHNGDEAQETKNEVKEQTDIKGEAAVEISNTNARQFEDNPGDLPEDATKGDSNVSAEDNPNLSEKQDEKLEENPVERSSEDIKTEDKSSEDTTTENEDKKTEDGGSNAENESNSDSAENNKESDETSTKDSDSDESEKKFESDDNKKSDADESEKQSDNSDETTDNRIEEKVEESDNKESDENSSEKNANDNTKQQSSNEVYPSGAQSELQDESTTETGSWSTQAAESKNEKESQESSKPTGYNWKLCNVSAGPDFIPCLDNWKAIRSLRSTKHYEHRERHCPEEPPTCVVPVPKGYKRSIEWPRSREKIWYHNVPHTKLAEVKGHQNWVKVTGEYLAFPGGGTQFKHGALHYIDFIQETVPDIAWGKRTRVILDVGCGVASFGGFLFERDVLAMSLAPKDEHEAQVQFALERGIPAISAVMGTKRLPFPGKVFDVVHCARCRVPWHIEGGKLLLELNRVLRPGGFFVWSATPIYQKLPEDVEIWNSMKALTKAICWELVSISKDQVNGVGVAVYKKPSSNECYEQRSKNEPPLCQDSDDPNAAWNIKLQACIHKAPVSSTERGSKLPEKWPARLTKVPYWLSSSQVGVYGKPAPEDFTADYEHWKRVVSKSYLNGLGIQWSNVRNVMDMRSVYGGFAAALRDLNVWVMNVVSIDSPDTLPIIYERGLFGIYHDWCESFSTYPRTYDLLHADHLFSRLKNRCNLAAVVAEADRILRPEGKLIVRDTVEIIEELESMVRSLQWKVRMTYSKDKEGLLCVQKSMWRPKEQEKLEYAII*	821

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lapu9g00852	820	MobiDBLite	consensus disorder prediction	233	272	-	-
	Lapu9g00852	820	Gene3D	Vaccinia Virus protein VP39	361	597	IPR029063	-
	Lapu9g00852	820	MobiDBLite	consensus disorder prediction	159	232	-	-
	Lapu9g00852	820	FunFam	probable methyltransferase PMT23	389	573	-	-
	Lapu9g00852	820	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferases	322	551	IPR029063	-
	Lapu9g00852	820	MobiDBLite	consensus disorder prediction	105	150	-	-
	Lapu9g00852	820	Pfam	Putative S-adenosyl-L-methionine-dependent methyltransferase	299	804	IPR004159	GO:0008168
	Lapu9g00852	820	CDD	AdoMet_MTases	417	512	-	-
	Lapu9g00852	820	MobiDBLite	consensus disorder prediction	50	66	-	-
	Lapu9g00852	820	PANTHER	SAM-DEPENDENT METHYLTRANSFERASE	21	808	IPR004159	GO:0008168
	Lapu9g00852	820	MobiDBLite	consensus disorder prediction	47	288	-	-
	Lapu9g00852	820	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferases	634	800	IPR029063	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lapu9g00852	Lapu-Chr9	12780860	12786633	Dispersed/Transposed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lapu9g00852	-		-	gmx:100777586	1346.26