Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00850 ATGTCTCCTCCCCTAATGGAAGTAAGTGCTTCCACTCTAGTTCTCTACCCTGCATCACAGCCACAAGAATCCAAAGAAGAGAATGGAGTGTTTGGTTTTAACTCAAATTTTGAGCAAATGAAAGGGGACATGCCCAAAGAGTTCCTATGGCCTTCTGGGGATTTGGTTAAGGTTGCCAAAGAGGAGTTGAAGGAGCCCCTTGTGGATTTAGGAATCATGAAGAATGGTGATGAGAAAGAAATTGCCAATGCTGCAGAGCTTGTGAGGAATGCCTGCTTGAAGCATGGCTTCTTCCAAGTGATCAACCATGGTGTGAACCCAGACCTCATAGATGCTGCCTACCATGAAATTGACGCCATTTTCAAGCTCCCTATGAGCCAAAAACTCACTGCTCAGAGGAAACCTGGTGGAGTCTCTGGCTACTCTGGTGCTCATGCAGATCGTTACTCCTCCAAATTGCCATGGAAAGAAACATTTTCTTTCCTCTTCCATCACCAAGGCTTCTCCAATTCCCAGATTGTTGACTACTTTGAATCTGTCTTAGGCCAGGACCTTAAACACACAGGGAGGGTGTATCAAAAGTACTGTGAAGCAATGAATGAGTTATGTTGGGTAATAATGGAGCTGTTGAGTAGAAGTTTGGGAGTGGATGATTTGCATTATAGAAGATTTTTTGAAGATGGTGACTCAATAATGAGGTGCAACTATTATCCACCTTGCAACAGTGCTAACCTCACATTAGGAACTGGCCCTCACACTGATCCAACTTCACTCACCATTCTTCATCAAGACCAAGTTGGAGGCTTAGAAGTTTTTGTAGATAACAAATGGCAAGCTGTTCGCCCTCGATCTGATGCCTTTGTCATAAACATTGGTGACACTTTCATGGCATTGTCAAATGGAAGATACAAGAGTTGTCTGCACAGGGCTGTGGTGAACACATACATGGAGAGAAGGTCACTTGTTTACTTTGTGTGTCCAAGAGATGACAAAGTGGTGAGGCCCCCAGAGATTCTGATAAGCAAAAATGAGGAAAGAAAGTACCCTGATTTTACATGGTCTAATTTGCGTGAATTCACACAGAAACACTATAGGGCTGATGTTGCTACACTCCAAAGCTTCATTCACTGGCAACAAACCTCTTCCCACTCATCCAACTAG 1161 0.4367 MSPPLMEVSASTLVLYPASQPQESKEENGVFGFNSNFEQMKGDMPKEFLWPSGDLVKVAKEELKEPLVDLGIMKNGDEKEIANAAELVRNACLKHGFFQVINHGVNPDLIDAAYHEIDAIFKLPMSQKLTAQRKPGGVSGYSGAHADRYSSKLPWKETFSFLFHHQGFSNSQIVDYFESVLGQDLKHTGRVYQKYCEAMNELCWVIMELLSRSLGVDDLHYRRFFEDGDSIMRCNYYPPCNSANLTLGTGPHTDPTSLTILHQDQVGGLEVFVDNKWQAVRPRSDAFVINIGDTFMALSNGRYKSCLHRAVVNTYMERRSLVYFVCPRDDKVVRPPEILISKNEERKYPDFTWSNLREFTQKHYRADVATLQSFIHWQQTSSHSSN* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00850 386 Gene3D - 26 358 IPR027443 -
Lapu9g00850 386 Pfam non-haem dioxygenase in morphine synthesis N-terminal 66 164 IPR026992 -
Lapu9g00850 386 SUPERFAMILY Clavaminate synthase-like 41 366 - -
Lapu9g00850 386 PRINTS Isopenicillin N synthase signature 287 313 - -
Lapu9g00850 386 PRINTS Isopenicillin N synthase signature 88 105 - -
Lapu9g00850 386 PRINTS Isopenicillin N synthase signature 252 273 - -
Lapu9g00850 386 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 66 357 - -
Lapu9g00850 386 Pfam 2OG-Fe(II) oxygenase superfamily 229 327 IPR044861 -
Lapu9g00850 386 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 227 327 IPR005123 -
Lapu9g00850 386 FunFam Gibberellin 20 oxidase 2 35 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00850 Lapu-Chr9 12757063 12761365 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00850 32 365 Glycosyltransferase AT5G59530 27.809 1.09e-28 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00850 K05282 - gmx:100816834 660.218