Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00848 ATGAGTAGCCACACTACTCGCCAGTTACCAGCTACACCTAAGATGCAGCAAAGGAAGGAGCGACGCATGTTCTCCACTTCTGATGACAGTGCCATGACCAAGCAAGTTCAGGCCACACATGCCCCTGATGGCCGTGAAATTGATGTCAAACCTATTCTACAAATCGTGGATGAAATTCTGGTTCGGTTCATTGCTCGCACTGTTGAGGGCTATGAAGTGAAAAGAGACCAAGATGCGTTGGAGATGACCGCTGCTCTGGCAGAATTCGACATGCTTGACTCGCTGGCTTACATCATAAACAAAATTTCCTGTGAGCTATCATGCAAGTGCTCGGGAGGTGGAGATGCACATTCATCAACGATGGTGTTACTGGGTTACATGTCTAGCTATGCATGGCATGCGAAAGTTGTGCTAACCTTAGCAGCATTTTCTGTTATTTTTGGAGAGTTTTGGCTTGTTGCTCAGTTGAGTGCTGAAAATACGCTTGCCAAGTCTGTGGCACTCCTTAAGCAACTGCCAGATGTTGCTGAGAATTTCATGTCCTTGAAACCCCATTTTGAAGCACTCATTAGGCTCGTGAAGGCTGCAATGGATGTTACCACCTGCATTGTTGAATTCAAGGAGCTTCCATCTGAATACATTTCAGAGGACACACCTCCTATGTCTGTTGCCTGTACTCACATTCCTATTGCTTCCTATTGGGTCATCAGAAGTATTGTGGCTTGTGCCTCACAAATTGCTAGTCTCATAGGCACGAGAAATGAGTCCATTTCGTCAACTACTGAGGCATGGGAATTATCTAGTCTGGCTCACAAAGTTACTAGTATTTATGAGCACCTCAAGAACCAACTGGTTCTTTGCTACCAATATATAGATGACAAGAGGCATATAGAGGCCTTCCATAATCTGAAACGTCTTTTCGAGACAGTCCATGTAGACAACATCAAAATTCTAAGAGCACTGATATATGCAAAGGATGATATCCTTCCACTTGTGGATGGAACTACAAAATCAAGGGTTAGTCTAGAGGTACTAAGGAGGAAACATGTGTTGCTGCTCATATCAGATCTTGATCTTTCACAAGAAGAGATCCTGGTACTTGATAATTTGTACAAAGATGCACGAGCAAGGGGTGACACACACTATGAGATGGTTTGGATCCCAGTTGTGGACAAAGCGACCTGGAATGAGATGAACAAACAGAAGTTTGAGTATTTGCAGTCATTGATGGCATGGTACAGCGTCTGTGATCCTTTCATCATTGAACCATCAGCAATTAAGTACATCAAAGAAGTGTGGAATTTCTCAAAGACAGCTATTCTAGTGGCCCTTGATCCACAAGGAAGATTGTCCTCCCCTAATGCCGTCCATATGATATGGATTTGGGGCAATTTAGCCTTCCCCTTCACAAGTGAGAAAGAAGAATCATTGTGGAAGCAAGAGATTTGGAGCCTTGAGCTGCTTGTTGATGGCATTGATCCTACAGTTTTAGAATGGATGACAGAGGGAAAACTCGTATGTCTGTATGGAGGTGAAGACCTGGAATGGATTGAGAAATTCACAGCAACAGCATTGAGTGTGGCAAAAGCTGGGAAGTTCCAGCTGGAGATGGCGTACGTGGGAAAGAGCAACGCGAAGGAGCGGATGCAGAAGATGATAAAAACCTTCTCCACGAGAAAGTTCAGTTACTTTTGGCCCAACGTGACGTCCATTTGGTTCTTCTGGACCCGTTTGGAGAGCATGCTGTACTCAAAGTTGCAGCATGGAAAGACTGTGGAAAACGACGAGATCATGAGCGAAGTGATGACTGTGCTGAGCTTCGACGGCAGTGATAGAGGGTGGGCGATTTTCTGCAGGGGCGCCACTGAAATGGCCAGAGCCAAGGGTGACAGTGCTCTGATATGCTTGCAGGACTTTGATAAGTGGAAGGATAGAGTTGAGGAAGATGGCGTGGTGCAAGCAATGAACGATTATCTCAACAAAAACAAACCCCCACATCACTGCAATCGCTTGATCCTTCCTGGGAGCACTGGTGGCATACCCCAGAAGGTTGTGTGTGCTGAATGTGGACGCCAAATGGAGAAATACTTCATGTATCGTTGTTGTGTTGAGTAA 2115 0.452 MSSHTTRQLPATPKMQQRKERRMFSTSDDSAMTKQVQATHAPDGREIDVKPILQIVDEILVRFIARTVEGYEVKRDQDALEMTAALAEFDMLDSLAYIINKISCELSCKCSGGGDAHSSTMVLLGYMSSYAWHAKVVLTLAAFSVIFGEFWLVAQLSAENTLAKSVALLKQLPDVAENFMSLKPHFEALIRLVKAAMDVTTCIVEFKELPSEYISEDTPPMSVACTHIPIASYWVIRSIVACASQIASLIGTRNESISSTTEAWELSSLAHKVTSIYEHLKNQLVLCYQYIDDKRHIEAFHNLKRLFETVHVDNIKILRALIYAKDDILPLVDGTTKSRVSLEVLRRKHVLLLISDLDLSQEEILVLDNLYKDARARGDTHYEMVWIPVVDKATWNEMNKQKFEYLQSLMAWYSVCDPFIIEPSAIKYIKEVWNFSKTAILVALDPQGRLSSPNAVHMIWIWGNLAFPFTSEKEESLWKQEIWSLELLVDGIDPTVLEWMTEGKLVCLYGGEDLEWIEKFTATALSVAKAGKFQLEMAYVGKSNAKERMQKMIKTFSTRKFSYFWPNVTSIWFFWTRLESMLYSKLQHGKTVENDEIMSEVMTVLSFDGSDRGWAIFCRGATEMARAKGDSALICLQDFDKWKDRVEEDGVVQAMNDYLNKNKPPHHCNRLILPGSTGGIPQKVVCAECGRQMEKYFMYRCCVE* 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00848 704 Pfam Sieve element occlusion C-terminus 473 702 IPR027944 -
Lapu9g00848 704 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE 11 703 IPR039299 GO:0010088
Lapu9g00848 704 Pfam Sieve element occlusion N-terminus 27 311 IPR027942 -
Lapu9g00848 704 MobiDBLite consensus disorder prediction 1 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00848 Lapu-Chr9 12651043 12655675 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00848 - - gmx:100811452 1352.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g00848 9 12651043 12655675 Lapu9g00848 9 12651043 12655675 ECH