Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00837 ATGCGAAACCTAACTAACACTCAAGAAATGGCGGAGAAGTTTGGAGTAGCAGCTGCAGCAGTAGCAGAGGAGAGCTCTAACTCCAGGGTCCTTCACCATACGACAGCGAAGCTCGTCGTTTTGGCCGACCTCAACGTCGATCCTCCCGAAGCCGACGACGACGACTCTTCCCTTGTCCCTCCTCCACCGATTGCAACATTGGCAAATGATGAAAGCAGCCAAGATAAGAGTTTGTTATCCAAAGACACTGATAGCATTGAAGGTGAAAGTAAAAGGTTGAACAAACTGGGCAAATGTCGCTCCAGACTTAGCAAGACAGATTCTTCTCTTGATTGTGTAGCTGATGCAGATGGTGATCAACATGTTCAAGGACCTCCTTCATCTCGGGAGGAAAAAGTTAGCAGTGTGAAGACTGGCCTGGTTCATGTTGCAAAGAAGATGCCCAAAAATGCTCATGCTCATTTTATACTTGGCTTGATGTACCAAAGATTAAGCCAGCCTCAAAAGGCTGTGTTGGCTTATGAGAAGGCAGAAGAGATCTTGCTCAGGCCTGAGGCTGAGATTGATAGGCCAGAGTTGCTTTCGTTAGTTCAGATTCACCATGCACAGTGCCTGTTACTAGAAAGTTCATCAGAAAATAGTTCTGATAAAGAACTTGAACCTCATGAACTTGAAGACATTCTTTCTAAGCTGAAAGAGTCAGTGCAGTCAGATATTAGACAGACAGCTGTATGGAACACACTGGGTTTCATCCTTCTTAAAACTGGTCGTGTGCAGAGTGCTATCTCAGTTTTGTCATCACTGTTGTCCATTGAACCAGAGAACTATGATTGCCTAGGAAATCTTGGCATAGCTTATCTTCAAATTGGGAATTTGGAATTATCTGCAAAATGTTTCCAACAATTGATTTTAAAAGATCAAAATCATCCTGCAGCTTTGGTCAATTATGCTGCCCTTCTTTTGAGTAAATATGCTTCAGTTGTGGCAGGTCCTGGTGCAAGTGCCGCAGAAGGTGCCATGGTTGATCAGATAATGGCTGCAAATGTTGCCAAGGAATGTTTGTTGGCTGCAATTAAAGCAGATAACAAATCAGCCCATCTATGGGCTAATCTTGCCTATGCATTTTCTATTAGTGGTGATCGTAGAAGTTCCAGCAAGTGCTTGGAGAAGGCTGCAAAACTGGAACCCAATTGCATGTCTACTAGATATGCTGTTGCTATCCATCGAATAAAGGAGGCAGAAAGATCGCAAGATCGTAGTGAACTCCTTTCTTGTGCTGGAAATGAAATGGCTTCTATAATAAGAGAAGGTGATTCATCCCTGGTTGAGATTCCAATAGCATGGGCTGGGCTTGCCATGGTTCACAAGGCTCAACATGAGATAGTGGCAGCATATGAAAGTGAACAGCACGGGTTGAGAGAAGTTGAAGAGCGTGCTGTTTGCAGTTTAAAGCAGGCTATAGCAGAAGATCCGAACGACGCTGTGCAGTGGCACCAACTCGGCGTTCATAGTCTCTATGCTCGGCAATTCAAAACATCTCAAAAATACCTCAAAGCTGCTGTTGCCTGTGACAAGGATTGCAGCTATGCATGGTCTAACCTAGGTGTCGCACTTCAACTATCAGAGGAACCATCACAAGCTGAAGAAGTATACAAGAAAGCATTGTCTTTGGCAACAACTGAACAAGCGCACGCTTTATTATCCAACTTGGGAATTCTGTACCGCCATCAGAAACAATATCAACGTGCGAAGGCTATGTTTACAAAGTCACTTGAACTACAGCCTGGGTATGCTCCTGCATTCAACAATCTGGGACTTGTGTTTGTTGCTGAGGGTCTTTTGGAAGAAGCCAAGTATTGTTTCAACAAAGCTCTCCAATCAGATCCCTTGCTGGATGCTGCTAAGTCTAATATGGTTAAGGCTGTTGTCATGTCAAAGTTATGCAAGGGCCTCTCCTCATGCGCTCTTAAAGAATGA 1977 0.4411 MRNLTNTQEMAEKFGVAAAAVAEESSNSRVLHHTTAKLVVLADLNVDPPEADDDDSSLVPPPPIATLANDESSQDKSLLSKDTDSIEGESKRLNKLGKCRSRLSKTDSSLDCVADADGDQHVQGPPSSREEKVSSVKTGLVHVAKKMPKNAHAHFILGLMYQRLSQPQKAVLAYEKAEEILLRPEAEIDRPELLSLVQIHHAQCLLLESSSENSSDKELEPHELEDILSKLKESVQSDIRQTAVWNTLGFILLKTGRVQSAISVLSSLLSIEPENYDCLGNLGIAYLQIGNLELSAKCFQQLILKDQNHPAALVNYAALLLSKYASVVAGPGASAAEGAMVDQIMAANVAKECLLAAIKADNKSAHLWANLAYAFSISGDRRSSSKCLEKAAKLEPNCMSTRYAVAIHRIKEAERSQDRSELLSCAGNEMASIIREGDSSLVEIPIAWAGLAMVHKAQHEIVAAYESEQHGLREVEERAVCSLKQAIAEDPNDAVQWHQLGVHSLYARQFKTSQKYLKAAVACDKDCSYAWSNLGVALQLSEEPSQAEEVYKKALSLATTEQAHALLSNLGILYRHQKQYQRAKAMFTKSLELQPGYAPAFNNLGLVFVAEGLLEEAKYCFNKALQSDPLLDAAKSNMVKAVVMSKLCKGLSSCALKE* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00837 658 ProSiteProfiles TPR repeat profile. 598 631 IPR019734 GO:0005515
Lapu9g00837 658 SUPERFAMILY TPR-like 146 400 IPR011990 GO:0005515
Lapu9g00837 658 Pfam Tetratricopeptide repeat 252 311 - -
Lapu9g00837 658 Gene3D Tetratricopeptide repeat domain 76 327 IPR011990 GO:0005515
Lapu9g00837 658 Gene3D Tetratricopeptide repeat domain 334 435 IPR011990 GO:0005515
Lapu9g00837 658 ProSiteProfiles TPR repeat profile. 528 561 IPR019734 GO:0005515
Lapu9g00837 658 ProSiteProfiles TPR repeat profile. 564 597 IPR019734 GO:0005515
Lapu9g00837 658 MobiDBLite consensus disorder prediction 112 134 - -
Lapu9g00837 658 Gene3D Tetratricopeptide repeat domain 564 641 IPR011990 GO:0005515
Lapu9g00837 658 Gene3D Tetratricopeptide repeat domain 476 563 IPR011990 GO:0005515
Lapu9g00837 658 Pfam Tetratricopeptide repeat 598 629 IPR019734 GO:0005515
Lapu9g00837 658 Pfam Tetratricopeptide repeat 365 398 IPR019734 GO:0005515
Lapu9g00837 658 ProSiteProfiles TPR repeat profile. 242 275 IPR019734 GO:0005515
Lapu9g00837 658 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-CONTAINING PROTEIN-RELATED 35 654 - -
Lapu9g00837 658 MobiDBLite consensus disorder prediction 47 85 - -
Lapu9g00837 658 Pfam Tetratricopeptide repeat 530 593 - -
Lapu9g00837 658 SUPERFAMILY TPR-like 474 644 IPR011990 GO:0005515
Lapu9g00837 658 SMART tpr_5 494 527 IPR019734 GO:0005515
Lapu9g00837 658 SMART tpr_5 242 275 IPR019734 GO:0005515
Lapu9g00837 658 SMART tpr_5 528 561 IPR019734 GO:0005515
Lapu9g00837 658 SMART tpr_5 445 478 IPR019734 GO:0005515
Lapu9g00837 658 SMART tpr_5 365 398 IPR019734 GO:0005515
Lapu9g00837 658 SMART tpr_5 151 184 IPR019734 GO:0005515
Lapu9g00837 658 SMART tpr_5 598 631 IPR019734 GO:0005515
Lapu9g00837 658 SMART tpr_5 276 309 IPR019734 GO:0005515
Lapu9g00837 658 SMART tpr_5 564 597 IPR019734 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00837 479 630 Glycosyltransferase AT3G04240 26.797 2.63e-09 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00837 - - gmx:100820184 1117.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g00837 9 12341053 12348932 Lapu9g00837 9 12341053 12348932 ECH