Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00828 ATGGGGAAGAAGACGAAGAAACCCGGCAAAGGCAAAGAGAAAACTGAGAGAAAAACCGCAAGAGCAGAAGAGAAGAAAGCTCGCAGGGAAACCAAGAAGCTTTCTCCCGAGGACGACATCGACGCCATTTTGTTGAGCATTCAGAAAGAGGAAGCGAAGAAGAAGGATGTTCACGTCGACGACAACGTTCCCGCGCCTTCTCCTCGCTCCAACTGCTCGCTCACCGTCAATCCGTTGAAAGAGACCGAGTTGATTCTCTACGGCGGCGAATTCTACAACGGGAACAAGACCTTCGTGTACGGCGATCTCTTCCGGTATGACGTGGAGAAGCTGGAATGGAAATTGGTTTCGAGTCCTAATAGTCCTCCTCCGCGCAGTGCTCATCAAGCGGTTGCGTGGAAGAATTATATTTATATTTTTGGTGGTGAGTTTACTTCTCCAAACCAAGAGCGGTTTCATCACTACAAGGATTTTTGGATGTTGGACCTGAAAACAAATCAGTGGGAGCAGCTTAATTTGAAAGGGTGCCCTAGTCCTCGTTCAGGACATCGAATGATATTGTACAAGCACAAGATTATTCTTTTTGGTGGCTTCTATGACACTCTTAGAGAAGTTCTGTACTATAATGATTTATATGTATTTGACCTTGATCAATTTAAGTGGCAAGAAATAAAGCCTAAGCCTGGAGCGATGTGGCCAACTGCACGTAGTGGTTTTCAATTATTTGTTTACCAAGATGACATATTTTTGTATGGTGGATATTCGAAAGAAGTTTCATCTGATAAGAACAACTCTGAGAAGGGAATTGTTCATTCAGATATGTGGTCACTCGATCCTAAGACTTGGGAATGGAGCAAGGTGAAGAAAAGTGGAATGCCTCCTGGACCCCGTGCTGGGTTCTCAATGTGTGTTCATAAGAGGAGGGCTCTGCTATTTGGTGGCGTTGTGGATATAGAAGTTGAAGGTGATGTAATGATGAGCTTGTTTTTGAATGAACTTTACGGGTTTCAGTTAGACACCAATCGCTGGTATCCTCTGGAGTTAAGAAAGGAGAAGTCCACAAAAGACAAGTTAAAAAAAATTGAACAAAATTGTCCTGATGATGTCAACAAGAAGATAAATCCAGCATGTACAGCAAGAGAAGAAACTGTGGAGTCGGAGGATGAAGACATTGATGATATATCCAAAAATATAGCGTCAAACATGTCTATTGTTGATTGTGAAAAGCTTACCAACTCTGACGGAAAGCCCAAGGAATCTGGTGCTAAATTGGACATTCAAAGTTCTTTGCCTGAGGTTGTGAAGCCCTGTGGACGTATTAATGCTTGCATGGCCGTAGGAAGAGACACATTATATATATATGGTGGCATGATGGAGATTAAAGATCAAGAAATCACTCTCGATGATTTGTATTCTTTGAACCTTAGCAAACTTGATGAATGGAAGTGCATCATACCGGCTTCGGAATCTGAATGGGTGGAAGCTTCAGAAGATGATGAAGAAGATGAAGATGATGATGAAGATGAATCAGATGGTGATAGTTCAACTGATGAGGATGAGGAGGAGGAAGAGCAAATTGAATCTTCTGCTCAGAATGCATCAGTTCAGGTTGGAGATGCTGTTGCTCTAATCAAAGGTGTGGGAAAGAATCTCCGGAGGAAAGAAAGGAGGTCACGGATAGAGCAGATTAGAGCCAGTCTTGGCTTGTCCGATTCACAGAGAACACCAATGCCAGGAGAATCCCTGAGGGATTTCTACAGGCGTACAAATATGTATTGGCAAATGGCAGCCCATGAACATACTCAACACACTGGAAAAGAACTCCGCAAGGATGGTTTTGATCTTGCTGAAGCGCGGTACAGGGAGCTAAAACCTATTCTTGACGAGCTGGCTCTACTAGAAGCTGAGCAGAAAGCTGAGGAGGCTGAAGGGCCAGAAACTAGTGCAAAGAAAAGAGGCAAGAAGAAAACTAGAAATTGA 1980 0.4333 MGKKTKKPGKGKEKTERKTARAEEKKARRETKKLSPEDDIDAILLSIQKEEAKKKDVHVDDNVPAPSPRSNCSLTVNPLKETELILYGGEFYNGNKTFVYGDLFRYDVEKLEWKLVSSPNSPPPRSAHQAVAWKNYIYIFGGEFTSPNQERFHHYKDFWMLDLKTNQWEQLNLKGCPSPRSGHRMILYKHKIILFGGFYDTLREVLYYNDLYVFDLDQFKWQEIKPKPGAMWPTARSGFQLFVYQDDIFLYGGYSKEVSSDKNNSEKGIVHSDMWSLDPKTWEWSKVKKSGMPPGPRAGFSMCVHKRRALLFGGVVDIEVEGDVMMSLFLNELYGFQLDTNRWYPLELRKEKSTKDKLKKIEQNCPDDVNKKINPACTAREETVESEDEDIDDISKNIASNMSIVDCEKLTNSDGKPKESGAKLDIQSSLPEVVKPCGRINACMAVGRDTLYIYGGMMEIKDQEITLDDLYSLNLSKLDEWKCIIPASESEWVEASEDDEEDEDDDEDESDGDSSTDEDEEEEEQIESSAQNASVQVGDAVALIKGVGKNLRRKERRSRIEQIRASLGLSDSQRTPMPGESLRDFYRRTNMYWQMAAHEHTQHTGKELRKDGFDLAEARYRELKPILDELALLEAEQKAEEAEGPETSAKKRGKKKTRN* 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00828 659 Gene3D - 43 368 IPR015915 GO:0005515
Lapu9g00828 659 MobiDBLite consensus disorder prediction 637 659 - -
Lapu9g00828 659 MobiDBLite consensus disorder prediction 12 35 - -
Lapu9g00828 659 Pfam Galactose oxidase, central domain 444 486 - -
Lapu9g00828 659 Pfam Galactose oxidase, central domain 68 122 - -
Lapu9g00828 659 PANTHER KELCH DOMAIN-CONTAINING PROTEIN 1 653 - -
Lapu9g00828 659 Coils Coil 12 32 - -
Lapu9g00828 659 Pfam Kelch motif 235 297 - -
Lapu9g00828 659 Pfam Domain of unknown function (DUF4110) 568 653 IPR025183 -
Lapu9g00828 659 SUPERFAMILY Kelch motif 82 483 IPR015915 GO:0005515
Lapu9g00828 659 MobiDBLite consensus disorder prediction 492 527 - -
Lapu9g00828 659 MobiDBLite consensus disorder prediction 489 534 - -
Lapu9g00828 659 Pfam Galactose oxidase, central domain 135 185 - -
Lapu9g00828 659 MobiDBLite consensus disorder prediction 1 35 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00828 166 343 Acyl Lipid Metabolism Gene Families AT3G05420 27.513 1.71e-11 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00828 - - gmx:100818228 1126.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g00828 9 12110358 12125459 Lapu9g00828 9 12110358 12125459 ECH