Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00827 ATGTTCACTCCCCCAATGCTGAAATCATCCTTCACTCCCATTTTCTGTGTGCTAACCCCTAAACCCAAACCTCAAAAACTTCCCTCTAACTCGTTAACCAAAACCTTCTTCACAAAGAGTACGCCACTTGTTCGACACAATGCCTCTCTCAACACTTCCACCCCACCACTCCCTTTGTCCGCCTACATCCACCTCCCTTTCTGCCGGAAACGCTGCCACTACTGCGACTTCCCCATCGTAGCTCTCGGCTCCGCCTCCACCCTAACCCACCATGACCCTCGCGTCTCCAATTATATCCACTGGCTCTGCCGGGAAATCACCGCCACCAAAGTAGATCAACCCGCTTCCATCACGCCCCTCCAGACTGTCTACTTTGGTGGTGGAACACCCTCGCTGGTGCCTCCTTCCATGGTTTCATCCGTTTTGGAGACTCTGAGGGTGAAGTTTGGGCTCTGTGAGGACGCCGAAATATCGATGGAGATGGACCCCGGCACGTTTGATGCTGAGAAGATGAGGGAGATGATGGCGTTGGGGGTTAATAGAGTTTCCTTGGGAGTGCAGGCGTTTCAGGAGGAGCTGTTGAGAGCCTGTGGGAGGGCACATGGGGTGCAAGAGGTTCATGAGGCTATTGGTGCTGTGAAGTCATGTGGGGTTGAGAATTGGAGCGTTGATCTCATAGCTTCGTTGCCTCATCAGAGTAGTGAGATGTGGGAGGAAAGTTTAAGGCTCACCATAGAGGCACAACCTTCTCACGTGTCTGTTTATGACTTGCAAATTGAGCAAGGAACAAAATTTGGACGATTGTACTCACCAGGGGAATTTCCAATGCCTTCTGAAACACAATCGGCTGAGTTCTACAAGATGGCTTCAAGAATGCTTTCTGATGCGAATTACAACCATTATGAAATCAGCAGCTACTGCAAGAGTGGGTACGAGTGCAAACACAACTTTATATACTGGAAGAACGAGCCTTTCTATGCCTTTGGCCTTGGCTCTGCAAGTTTTGTTGGTGGGTTGCGGTTTTCAAGACCAAGGAAGGTCAATGATTACATAAATTTTGTGCAGAATCTGGAAAATGGATTAGTAGATAGCTCTGGTGATGGTAACATTCATGGCAAGGACATGGCCATGGATGTGGTGATGCTGTCCCTAAGAACTGCACGAGGCCTAGACTTAAAGAGTTTCCAAGAATCATTTGGCAGCTCTGCTGTTTTGTCTTTGCTAGAGGCTTATAAACCTTATGTTGAGAGCGGACTTGTGGTTTGCTTGGACGAGCATAGGAGAGCCATTATAATAGATGACCTTTATAATTCTTTTTCGTATAAAACTAATATAGAAAAGAGGGTGGCTTACATAAGGCTAAGTGATCCAGAAGGTTTCCTCTTATCAAATGAGTTGATAGCCCTTGCTTTTGGGGTTATTGACTCTTGGAAGGATTGTCCTCCATACCAAGAAGCAAAAGCCACTTGA 1470 0.4728 MFTPPMLKSSFTPIFCVLTPKPKPQKLPSNSLTKTFFTKSTPLVRHNASLNTSTPPLPLSAYIHLPFCRKRCHYCDFPIVALGSASTLTHHDPRVSNYIHWLCREITATKVDQPASITPLQTVYFGGGTPSLVPPSMVSSVLETLRVKFGLCEDAEISMEMDPGTFDAEKMREMMALGVNRVSLGVQAFQEELLRACGRAHGVQEVHEAIGAVKSCGVENWSVDLIASLPHQSSEMWEESLRLTIEAQPSHVSVYDLQIEQGTKFGRLYSPGEFPMPSETQSAEFYKMASRMLSDANYNHYEISSYCKSGYECKHNFIYWKNEPFYAFGLGSASFVGGLRFSRPRKVNDYINFVQNLENGLVDSSGDGNIHGKDMAMDVVMLSLRTARGLDLKSFQESFGSSAVLSLLEAYKPYVESGLVVCLDEHRRAIIIDDLYNSFSYKTNIEKRVAYIRLSDPEGFLLSNELIALAFGVIDSWKDCPPYQEAKAT* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00827 489 CDD Radical_SAM 68 279 - -
Lapu9g00827 489 Gene3D tm_1862 like domain 67 294 IPR023404 -
Lapu9g00827 489 NCBIfam radical SAM family heme chaperone HemW 59 420 IPR004559 GO:0004109|GO:0005737|GO:0006779|GO:0051539
Lapu9g00827 489 SFLD HemN-like, clustered with heat shock genes 58 423 IPR004559 GO:0004109|GO:0005737|GO:0006779|GO:0051539
Lapu9g00827 489 SFLD anaerobic coproporphyrinogen-III oxidase like 58 423 - -
Lapu9g00827 489 ProSiteProfiles Radical SAM core domain profile. 53 296 IPR007197 GO:0003824|GO:0051536
Lapu9g00827 489 PANTHER COPROPORPHYRINIGEN III OXIDASE 46 476 IPR034505 -
Lapu9g00827 489 Pfam Radical SAM superfamily 63 243 IPR007197 GO:0003824|GO:0051536
Lapu9g00827 489 SUPERFAMILY Radical SAM enzymes 50 427 - -
Lapu9g00827 489 SMART MiaB 58 288 IPR006638 GO:0003824|GO:0051536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00827 - - gmx:100779022 836.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g00827 9 12089366 12092048 Lapu9g00827 9 12089366 12092048 ECH