Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00751 ATGGCTGCTACTGCCCCAAGATTCATCAAGTGTGTGACCGTTGGGGATGGAGCTGTAGGGAAGACCTGCATGCTCATTTGCTACACCAGCAACAAATTCCCCACGGACTATATTCCCACTGTGTTTGATAATTTCAGTGCAAATGTGGTTGTTGAAGGCATAACTGTCAATTTAGGCCTTTGGGATACAGCTGGGCAAGAGGATTACAACAGGCTGAGGCCCTTGAGCTACAGGGGGGCAGATGTCTTTGTCTTGGCTTTTTCTTTAGTTAGTCGCGCAAGCTATGAGAATGTGCTGAAGAAGTGGATCCCTGAACTCCAGCATTTTGCCCCTGGCATCCCAGTGGTATTAGTTGGCACCAAATTGGATCTTCGGGAAGACAAGCACTATATGGCTGATCATCCAGGCTTGCAGCCCGTGACTACTGAGCAAGGTGAGGAACTCCGTAAACAGATTGGAGCTACCTATTATATCGAATGCAGCTCAAAAACTCAACAGAATGTGAAGGGAGTTTTTGATGCTGCAATAAGAATGGTCATCAAGCCTCCACAAAAGCAAAACGAGAAGAGGAAGAAAAAACCACGAGGCTGTTTCCTTCAAATATTTTATTGGTTGGTTGTACTCACCCAAAATTTATTGAGAATCAACAACTGA 654 0.4526 MAATAPRFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVVEGITVNLGLWDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHFAPGIPVVLVGTKLDLREDKHYMADHPGLQPVTTEQGEELRKQIGATYYIECSSKTQQNVKGVFDAAIRMVIKPPQKQNEKRKKKPRGCFLQIFYWLVVLTQNLLRINN* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00751 217 Pfam Ras family 10 180 IPR001806 GO:0003924|GO:0005525
Lapu9g00751 217 ProSiteProfiles small GTPase Rab1 family profile. 4 217 - -
Lapu9g00751 217 PANTHER RHO FAMILY GTPASE 7 198 IPR003578 GO:0005525|GO:0007264
Lapu9g00751 217 CDD Rop_like 8 180 - -
Lapu9g00751 217 SMART ras_sub_4 6 182 - -
Lapu9g00751 217 Gene3D - 3 199 IPR027417 -
Lapu9g00751 217 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 179 IPR027417 -
Lapu9g00751 217 SMART rho_sub_3 11 182 IPR001806 GO:0003924|GO:0005525
Lapu9g00751 217 FunFam Rac-like GTP-binding protein 3 2 200 - -
Lapu9g00751 217 NCBIfam small GTP-binding protein domain 9 173 IPR005225 GO:0005525
Lapu9g00751 217 PRINTS Transforming protein P21 ras signature 32 48 - -
Lapu9g00751 217 PRINTS Transforming protein P21 ras signature 111 124 - -
Lapu9g00751 217 PRINTS Transforming protein P21 ras signature 49 71 - -
Lapu9g00751 217 PRINTS Transforming protein P21 ras signature 157 179 - -
Lapu9g00751 217 PRINTS Transforming protein P21 ras signature 9 30 - -
Lapu9g00751 217 ProSiteProfiles small GTPase Ras family profile. 4 208 IPR001806 GO:0003924|GO:0005525
Lapu9g00751 217 SMART rab_sub_5 9 182 - -
Lapu9g00751 217 ProSiteProfiles small GTPase Rho family profile. 2 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00751 Lapu-Chr9 10112773 10117095 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00751 5 195 EF-hand Containing Proteins AT5G27540 25.773 8.74e-16 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00751 K04392 - gmx:100499774 399.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g00751 9 10112773 10117095 Lapu9g00751 9 10112773 10117095 ECH