Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00691 ATGGGGGAGCACCTTGTGCTATCTGTTGTTGACCCTTTTCTTATAGCACCTGCAACTTTGCAACCCCAGCTTGGTGGTGACGCCGGAGATTCACTCACTGAGGGTGCTTCTCATGTCAATGATGTTGGGGAATGTGATGCTCTGGAAGAACAAGAAAAAGAAAAAGACCTTACCCTAATGGTGGAGTGTCGCATTTGTCAGGAAGATGATACTCTTCAAAATTTGGACATACCCTGTGCATGCAGTGGAACCTTGAAGTTTGCTCATAGGGGATGTGTTCAGCTATGGTGCTACGAGAAGGGTGATACAATTTGTGAGATCTGCCATGAGCCATTCAAACCTGGCTATTGTGCGACAACAAATGTCTACGATCCTGGAGATACTTCAATTGATATCAGTGATGACTGGGCAACCGCTAGTATTCCTTTAGATTTGCACAATTCTCGACTTTTGGCTATTGCAGCTGTAGAGCACCAAGTTCCGGAGACTCGTGAAGATTATGTCTATGCTGCTGGCACTGGTGGAATTACATTGTGGCACTCTGTTGGTCTAATTTTAATGGCTCTTTTACTTCTGAGGCATGTCGCTTCCCTCTTCAATCCTGATGTGGAGAAAGTTTTAACTTATTTTTGTTTTTTCTTTCTTCGTGCGGCTGCAGTGGTCCTTCCTTGCTATCTTATGGCCCGGATAATTTGCGTAATACAGCATCAAAGGCAAAGACAACAAGCACCTGAAGAACTTGCATTTATGCTACAAGCAGACGAACAACAAGGTTAG 777 0.4427 MGEHLVLSVVDPFLIAPATLQPQLGGDAGDSLTEGASHVNDVGECDALEEQEKEKDLTLMVECRICQEDDTLQNLDIPCACSGTLKFAHRGCVQLWCYEKGDTICEICHEPFKPGYCATTNVYDPGDTSIDISDDWATASIPLDLHNSRLLAIAAVEHQVPETREDYVYAAGTGGITLWHSVGLILMALLLLRHVASLFNPDVEKVLTYFCFFFLRAAAVVLPCYLMARIICVIQHQRQRQQAPEELAFMLQADEQQG* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00691 258 Pfam RING-variant domain 63 108 IPR011016 GO:0008270
Lapu9g00691 258 SMART ringv_2 62 109 IPR011016 GO:0008270
Lapu9g00691 258 SUPERFAMILY RING/U-box 61 113 - -
Lapu9g00691 258 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 58 114 IPR013083 -
Lapu9g00691 258 CDD RING_CH-C4HC3_MARCH 63 109 - -
Lapu9g00691 258 ProSiteProfiles Zinc finger RING-CH-type profile. 55 115 IPR011016 GO:0008270
Lapu9g00691 258 Pfam Protein of unknown function (DUF3675) 114 231 IPR022143 -
Lapu9g00691 258 PANTHER RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING 1 241 IPR033275 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00691 Lapu-Chr9 8515724 8519851 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00691 - - vra:106756822 379.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g00691 9 8515724 8519851 Lapu9g00691 9 8515724 8519851 ECH