Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00669 ATGTTGGAGGCTCCAACCTTTCTTGTTTCGAGGGACTTACCGAGCTCATGTGAGCAAGAGACCAGGTGGATTTACAATTCCTTCTGTGTGATGCAGCTCACAAACAATAAGCGTCGACTGGAGCTAGAGGAAGAAGCTGTGCTGAGAAAGTCATGCAAGCTTTCTGATGCTCCAGAGAAAGGGGAAACAACGAAGAACATCCAAGATCTTTTTCTATCTGTTAACCAAGCAAATGATCAAAATCATACAAGTGACCAATCAGATTCAAGTTCGCTTATCTACCAACTTGGTCGGGATATCTCAATTAATTGTCTCCTACGATGCTCAAGGTCTGACTATGGTTCGATTGCCTCATTGAACCAAAGTTTTCGATCTCTCATCCGAACAGGAGAGCTTTATAGGCTGAGGCGGCAGATGGGTATAATAGAGCATTGGGTTTACTTCTCTTGTAATCTTCCTGAATGGGAGGCATTTGATCCAAACACTGCTAGATGGATGCGTTTGCCTAGAATGCCTTCTAACGAATGCTTTATCTGTTCAGATAAGGAGTCATTAGCTGTTGGTACAGAGCTTCTTGTTTTCGGAAAGGAGATAATGTCTCCTGTCATATACAGATATAGCATTTTGATGAACTCCTGGTCATCTGGTATGGAAATGAATGTTCCTAGATGCTTGTTTGGATCTGCCAGTCTTGGAGAAGTTGCCATATTAGCTGGTGGTTGTGATCCGCGTGGTAACATTTTGAGCTCTGCAGAACTTTATAATTCAGAAACTGGCACATGGGAGCTTCTTCCAAACATGAATAAAGCTAGGAAAATGTGCTCTGGGGTGTTTATAGATGGGAAATTTTATGTCATTGGTGGGATTGGAGTAGGTAACTCACGGCAGTTAACATGTGGTGAAGAGTTTGATCTGCAGACAAGAAAATGGAGAGAAATACCCAACATGTTCCCCGGACGTAACGGAGGATCTGAGGTGACTGAGGTATTGGCTGCTGCTGAGGCACCTCCTTTGGTTGCAGTTGTACATAATGTATTGTATGCTGCAGATTATGCCCTACAAGAGGTAAGGAGATATGACAAAGATAATAATTCATGGGTCACTATTGGAAGATTACCTGACCGTATAGTTTCAATGAATGGCTGGGGATTAGCCTTTCGTGCATGTGGAAATCGTCTAATTGTTATTGGTGGACCAAGAGCTTTAGATGGAAGGGTAATTGAGATAAATGCTTGTGTCCCTGGTGAAGGTGTGCCAGAGTGGAACCTGCTTGCTAGCAGGCAGTCAGGAAGCTTTGTGTATAACTGCGCAGTGATGGGATGCTGA 1326 0.4336 MLEAPTFLVSRDLPSSCEQETRWIYNSFCVMQLTNNKRRLELEEEAVLRKSCKLSDAPEKGETTKNIQDLFLSVNQANDQNHTSDQSDSSSLIYQLGRDISINCLLRCSRSDYGSIASLNQSFRSLIRTGELYRLRRQMGIIEHWVYFSCNLPEWEAFDPNTARWMRLPRMPSNECFICSDKESLAVGTELLVFGKEIMSPVIYRYSILMNSWSSGMEMNVPRCLFGSASLGEVAILAGGCDPRGNILSSAELYNSETGTWELLPNMNKARKMCSGVFIDGKFYVIGGIGVGNSRQLTCGEEFDLQTRKWREIPNMFPGRNGGSEVTEVLAAAEAPPLVAVVHNVLYAADYALQEVRRYDKDNNSWVTIGRLPDRIVSMNGWGLAFRACGNRLIVIGGPRALDGRVIEINACVPGEGVPEWNLLASRQSGSFVYNCAVMGC* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00669 441 Pfam Kelch motif 270 316 IPR006652 GO:0005515
Lapu9g00669 441 Pfam Kelch motif 222 268 IPR006652 GO:0005515
Lapu9g00669 441 SUPERFAMILY Kelch motif 150 437 IPR015915 GO:0005515
Lapu9g00669 441 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 82 441 - -
Lapu9g00669 441 SMART kelc_smart 234 281 IPR006652 GO:0005515
Lapu9g00669 441 SMART kelc_smart 282 331 IPR006652 GO:0005515
Lapu9g00669 441 FunFam F-box/kelch-repeat protein SKIP11 138 426 - -
Lapu9g00669 441 Coils Coil 30 50 - -
Lapu9g00669 441 Gene3D - 135 413 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00669 Lapu-Chr9 8073790 8076695 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00669 96 372 Miscellaneous Gene Families AT4G33900 24.601 8.60e-12 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00669 - - gmx:100813260 837.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g00669 9 8073790 8076695 Lapu9g00669 9 8073790 8076695 ECH