Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00667 ATGGCAAACGAACCTGCGAGCTTCTGGACTCAGGCAAACGCACTCCTTAGGAAGAATTTAACCTTTCAGAAGCGAAATGTTAAAACAAACGTTCGACTCATCATGTTCCCGTTCCTGTTGTGTCTGTTGCTGGTTCTGCTCCAACGCCTGGTGGAGACTCAATTGGACAAGGCAGAGAACAAGTGTGGGTGCGTTTGTGTGAGGAGACAAGGGGACACGTGTGTGGAGGAGGAGTGCGGGGTTGAGCATTCGGATTTGGACCAAGTTACAACCTGCGCCATTCCCAATCCTCCGGAATGGCCTCCTCTGTTGCAAGTGCCGGCTCCACAGTACCGAGCTGTGAGAACGGACAATTTTCCCTTTTCGGATTATCCAAACGCCTCCTGCAGGAGGAATGGCTCCTGCCCTGTCACTATGCTCTTCACTGGCACAAATCAGTCTTTTGGAGAAATTATATCTGGGAATATGATCCCAAGTTCCTTCACTCCAATAAACAACTCTGCTGTTATGGCTAGTTTGGCAGCAAATGTCGCTGGATCAGCCTCAATGACAGAGAACACCAATTTTCTGGAACCTGCTTTCTTTTCTGATCTTCCTATTTATTATCTACAAAGTCAGTGCACGCAGAACTCTACATTTTCCATTTCTTTTGAGCTATCAGCAGCAATTAGCAAGCAACAAGAGTTAGTATGCGCTGAGGGTTTACATTTATGGCGTAATAGTGCTTCTGAAGTGAACAATGAACTATATAGAGGCTATCGGAAAAGTAACCAAGAGGAACAAATCGAAGAGATAGCTGCAGGTTATGATTTTCTAAATTCAAATGGGAGTATATTTAATGTCAGCATATGGTACAACTCCACCTATAAAAACGACACTGGTTCTACTCAAATTGCATTGGCGCGTATTCCTCGTTCTGTTAATCTGGTATCAAATTCCTATCTTCAGTTTCTGTTGGGACCTGATACCAAAATGTTTTTTGAGTTTGTAAAGGAAATGCCAAAACCTTCAACCCCAATTAAATTTGATCTGGCTTCTCTTTTGGGTGGTCTCTTCTTTACATGGGTCATCCTGCAACTTTTCCCTATTGCCTTAACATCGCTAGTGTATGAGAAGCAACAAAAATTAAGAATCATGATGAAAATGCATGGTCTTGGTGATGGGCCATATTGGATGATTTCGTATGGTTATTTTCTTGCCATATCCATTGTCTACATGCTGTGTTTTGTGATATTTGGCTCAGTCATAGGGTTGAATTTCTTCACAATGAATGATTACAGCATCCAATTCGTGTTTTATTTCATCTATGTAAATTTACAAATTGCACTGGCTTTTCTATTGGCCTCCGTGTTTTCAAATGTTAAAACTGCTACAGTAATTGCATATATAGGTGTGTTTGGAACTGGGCTATTAGCTGGCTTTCTTTTCCAATTTTTTGTTCAAGACACATCATTTCCGAGAGGGTGGATCATTGTTATGGAGCTGTATCCTGGGTTTGCTTTATATCGTGGGTTGTACGAGTTTTCGCAATATTCCTTTAGTGGGGATGCTTTGGGAACTGATGGTATGCGCTGGGGTGATCTGAGTGATAGCGCAAATGGCATGAAGGAGGTCTTAATTATAATGTTCGTGGAGTGGCTTTTGGTGCTTGTCTTTGCTTATTATATCGATCAAGTTTTGTCATCAGGAAGCAGAAAAAGTCCGCTTTTTTTCTTGAAAAGATTTCAGAAAAAGCCTCATTCTTCTTTTAGGAAGCCTAGTATCCGAAGGCAGAAATCTAAGGTTTTTGTTCAGATGGAGAAACCTGATGTCACTCAAGAGAGGGAGAAGGTGGAGCAACTGTTACTTGAACCGACCATTAATCAAGCAATTGTATGCGACGACCTGAAAAAGGTCTACCCGGGGAGGGATGGTAACCCTGAGAAACATGCAGTGAGAGGGTTGTCCCTTGCTTTGCCCCAAGGAGAATGCTTTGGTATGCTTGGTCCCAATGGTGCTGGGAAGACTTCTTTTATCAATATGATGATCGGTCTCACGAAGCCAACCTCTGGAACAGCATTTGTTCAAGGTCTTGACATAAGAACTCATATGGATGGAATATATACTAGCATGGGTGTATGCCCACAACATGATTTGCTGTGGGAATCCCTGACAGGAAGAGAGCATCTACTCTTTTACGGCAGACTTAAAAATCTTAAAGGTTCAGCCTTGACAGAAGCAGTGGAAGAATCATTGAAAAGTGTAAACCTTTTTCATGGAGGAGTGGCAGATAAACAAGCTGGAAAATACAGTGGAGGAATGAAAAGGAGGCTTAGTGTGGCAATTTCATTGATTGGAGATCCTAAAGTTGTTTATATGGACGAGCCAAGTACTGGATTAGACCCTGCATCAAGAAACAACTTATGGAATGTTGTCAAGCGTGCAAAACAAGATCGTGCAATCATTCTTACCACACATTCCATGGAAGAGGCAGAAGTCCTATGCGATCGATTAGGAATATTTGTAGATGGTAGCTTGCAGTGCATAGGAAACCCAAAGGAGTTGAAAGGTAGGTATGGAGGAACTTATGTCTTCACAATGACAACATCAGTGGATGATGAAAAGGATGTAGAGAATTTGGTACGAGGGCTTTCCCCAAATGCTAACAAGATCTACCATATCTCTGGTACACAAAAGTTTGAGCTACCAAAGGACGAGGTTAAAATAGCAGATGTATTCCAAGCTGTTGAAACTGCAAAGAGAAGCTTCACCGTTTCAGCATGGGGTTTAGCCGATACCACATTGGAAGATGTCTTCATCAAAGTTGCACGTGGCGCTCAGGCATTTGACACCTTGTCATAG 2841 0.4227 MANEPASFWTQANALLRKNLTFQKRNVKTNVRLIMFPFLLCLLLVLLQRLVETQLDKAENKCGCVCVRRQGDTCVEEECGVEHSDLDQVTTCAIPNPPEWPPLLQVPAPQYRAVRTDNFPFSDYPNASCRRNGSCPVTMLFTGTNQSFGEIISGNMIPSSFTPINNSAVMASLAANVAGSASMTENTNFLEPAFFSDLPIYYLQSQCTQNSTFSISFELSAAISKQQELVCAEGLHLWRNSASEVNNELYRGYRKSNQEEQIEEIAAGYDFLNSNGSIFNVSIWYNSTYKNDTGSTQIALARIPRSVNLVSNSYLQFLLGPDTKMFFEFVKEMPKPSTPIKFDLASLLGGLFFTWVILQLFPIALTSLVYEKQQKLRIMMKMHGLGDGPYWMISYGYFLAISIVYMLCFVIFGSVIGLNFFTMNDYSIQFVFYFIYVNLQIALAFLLASVFSNVKTATVIAYIGVFGTGLLAGFLFQFFVQDTSFPRGWIIVMELYPGFALYRGLYEFSQYSFSGDALGTDGMRWGDLSDSANGMKEVLIIMFVEWLLVLVFAYYIDQVLSSGSRKSPLFFLKRFQKKPHSSFRKPSIRRQKSKVFVQMEKPDVTQEREKVEQLLLEPTINQAIVCDDLKKVYPGRDGNPEKHAVRGLSLALPQGECFGMLGPNGAGKTSFINMMIGLTKPTSGTAFVQGLDIRTHMDGIYTSMGVCPQHDLLWESLTGREHLLFYGRLKNLKGSALTEAVEESLKSVNLFHGGVADKQAGKYSGGMKRRLSVAISLIGDPKVVYMDEPSTGLDPASRNNLWNVVKRAKQDRAIILTTHSMEEAEVLCDRLGIFVDGSLQCIGNPKELKGRYGGTYVFTMTTSVDDEKDVENLVRGLSPNANKIYHISGTQKFELPKDEVKIADVFQAVETAKRSFTVSAWGLADTTLEDVFIKVARGAQAFDTLS* 947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00667 946 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 624 861 IPR003439 GO:0005524
Lapu9g00667 946 Gene3D - 616 880 IPR027417 -
Lapu9g00667 946 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 623 852 IPR027417 -
Lapu9g00667 946 Pfam ABC transporter 646 790 IPR003439 GO:0005524
Lapu9g00667 946 ProSitePatterns ABC transporters family signature. 763 777 IPR017871 GO:0005524|GO:0016887
Lapu9g00667 946 FunFam ABC transporter A family member 7 613 889 - -
Lapu9g00667 946 CDD ABC_subfamily_A 628 849 - -
Lapu9g00667 946 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 593 940 IPR026082 GO:0016020|GO:0055085|GO:0140359
Lapu9g00667 946 SMART AAA_5 654 837 IPR003593 GO:0016887
Lapu9g00667 946 Pfam ABC-2 family transporter protein 251 555 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00667 Lapu-Chr9 7980093 7989090 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00667 628 853 Calmodulin-binding Proteins AT2G36910 24.793 1.31e-12 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00667 - - gmx:100805474 1743.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g00667 9 7980093 7989090 Lapu9g00667 9 7980093 7989090 ECH