Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00510 ATGTGGGGTTTCATCATTCTCCGTGGAAACCATGAAGAATGTAAAGATAAACAAAGTGGTGTCTCTCTTTCCTTCTGCTGCAGCTCTTGGTTCTGTCTGTTCGAAGACTGGTTGAGAAACATGGAGACAGTAAACGCAAACCCAACAGCAGCACCAGCAGCACATATTGTTCAGATTGAACTTCCACACCCTTCTCGCCACATACTGCAAGATAGAAGGGAATACTTACAGAAATGTGTACCCCTTTATAAGCTAGCACTGAGAGGTGATTGGAATGAAGCCAAGCGCATGATAGATGAAGACACTAGTCTATTAAATGCAGCCATAACAAAGGAATGGGGGACACTACTTCATGTTGTGGCAGGAACAAACCATGTTCACTTTGTGAATCAACTGGTTAAATTACTTAACCCAGATGACCTGGAACTGCGAAATTTCAATGGAAACACAGCGTTTTGCTATGCTGCTGCATCTGGAAACATGGAAATCGCTGCTATGATGATCAAGAAAAATGAAGGCCTGCCAAAAATCAGAGGCGGAGAAGAAGCCACTCCTCTTTATATGGCTGTCTTGCAGGGAAAAGGTGAAATGGCAAGGCATCTCTACCCTCTCACTACCAACATTTTAGAAGAAGATGACTGGACGATGCTGTTCTTCCTCTGCATAAAAACCGAATTGTATGATATTGCTTTGCAAATTCTACAAGAACACACAGTGCTGGCACTGGCGAGGGATGAGAACAACGACTCAGGCTTGCATCTATTGGCTCGAAAGACTTGTGGTTTTAGCGGTCGAGGTCAATGGTATCTTCCAAACCAGATCTTGAACTCTAGCATGAAGGCAACTCCATTCGTCCAACTTGTTGAGTGTCTTTGGAGAATGCTTCACGACCAAGATTATGATGAAACTGAGTTGAGGACTTTCATAAGCCATCCATCACAAATAACATTTGATGCTACGCAAGTTGGAAATTTTGAATTTCTAGCTACACTTATGAGGTCTTACCCTGATTTATTATGGGAAGTGGATGAAAACAACCGAACCATAATTCACACTGCTGTTCTTCACCGCCATTCAACCATCTATAGCCTAATCCACGAACTAGGCTCCATCAAAGATTTCATAGCAACTTTTGAAGACGATGAAGGAAACAACATATTGCATTATGCTGCTATGTTGACACCTTCCGACAAACTCAGCTTAATTTCTGGAGCAGCTCTTCAAATGACGCATGAATTACTATGGTTCCAGGCGGTGAAGAAAATAATGCTGCTGGTAAATGTAGAGAAGAAAAATGCTGAAGGAAAAACTCCTGGTGAAGTATTTTCTGAGCAGCATAAAGAACTATTGAAAAAGGCAGGATCGTGGACCAAGGGCACAGCTATTAATTGCATGCTAGTATCTGCACTCATAACCACAGGAGTTTTCACTGCTACATTTATGGTACCTGGTGGCAACAATAAAAAATCAGGAACTCCCAACTCTTTGCAGGAACAAGCATTCCTGGTTTTTTCATTATCAGTTGCATGTGCACTGATATCAGCATCAGCCTCCATACTAATGTTCTTGTCCATTCTCATTTCGAGTTATGCAGAGGATGAATGTTTCAAGTCCCTCCCTTACAAGTTACTCTTTGGTATGATCACACAAATCATCTCCATCACAACCATGATGATATCGTTCGGTGCTGCATTTTACGTAACATATTCCCATGGTTCAACCAGGGTTCCATTTTCTATTTTCGTGCTTTCGTTTCTGCCAATACCCTTGTTCAAACCACTATGGTCAGATATTATCCATTCTTCTTATCTTTGTATGTCGCTATTTTGGCCTAGAAAATAA 1842 0.4153 MWGFIILRGNHEECKDKQSGVSLSFCCSSWFCLFEDWLRNMETVNANPTAAPAAHIVQIELPHPSRHILQDRREYLQKCVPLYKLALRGDWNEAKRMIDEDTSLLNAAITKEWGTLLHVVAGTNHVHFVNQLVKLLNPDDLELRNFNGNTAFCYAAASGNMEIAAMMIKKNEGLPKIRGGEEATPLYMAVLQGKGEMARHLYPLTTNILEEDDWTMLFFLCIKTELYDIALQILQEHTVLALARDENNDSGLHLLARKTCGFSGRGQWYLPNQILNSSMKATPFVQLVECLWRMLHDQDYDETELRTFISHPSQITFDATQVGNFEFLATLMRSYPDLLWEVDENNRTIIHTAVLHRHSTIYSLIHELGSIKDFIATFEDDEGNNILHYAAMLTPSDKLSLISGAALQMTHELLWFQAVKKIMLLVNVEKKNAEGKTPGEVFSEQHKELLKKAGSWTKGTAINCMLVSALITTGVFTATFMVPGGNNKKSGTPNSLQEQAFLVFSLSVACALISASASILMFLSILISSYAEDECFKSLPYKLLFGMITQIISITTMMISFGAAFYVTYSHGSTRVPFSIFVLSFLPIPLFKPLWSDIIHSSYLCMSLFWPRK* 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00510 613 PANTHER CASKIN 110 603 - -
Lapu9g00510 613 SMART ANK_2a 345 374 IPR002110 GO:0005515
Lapu9g00510 613 SMART ANK_2a 112 140 IPR002110 GO:0005515
Lapu9g00510 613 SMART ANK_2a 147 176 IPR002110 GO:0005515
Lapu9g00510 613 SMART ANK_2a 181 210 IPR002110 GO:0005515
Lapu9g00510 613 Gene3D - 314 454 IPR036770 -
Lapu9g00510 613 Gene3D - 77 281 IPR036770 -
Lapu9g00510 613 Pfam Ankyrin repeats (3 copies) 117 202 IPR002110 GO:0005515
Lapu9g00510 613 SUPERFAMILY Ankyrin repeat 81 393 IPR036770 -
Lapu9g00510 613 Pfam Domain of unknown function 456 567 IPR026961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00510 Lapu-Chr9 5719792 5726807 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00510 - - gmx:100813731 843.573